Evidence map›Paper›PMID 22189470›Full record

ArticleHuman heredity2011

KELVIN: a software package for rigorous measurement of statistical evidence in human genetics.

Veronica J Vieland, Yungui Huang, Sang-Cheol Seok, John Burian, Umit Catalyurek, Jeffrey O'Connell, Alberto Segre, William Valentine-Cooper

Open access · hybridAbstract read
In one paragraph

Article in Human heredity, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 37 citations in OpenAlex.

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  20. Measurement of statistical evidence on an absolute scale following thermodynamic principles.Theory in biosciences = Theorie in den Biowissenschaften · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Veronica J VielandBattelle Center for Mathematical Medicine, Research Institute at Nationwide Children's Hospital, Ohio State University, 700 Children’s Drive, Columbus, OH 43205, USA. Veronica.Vieland@nationwidechildrens.org
Yungui Huang
Sang-Cheol Seok
John Burian
Umit Catalyurek
Jeffrey O'Connell
Alberto Segre
William Valentine-Cooper
Nationwide Children's Hospital · USThe Ohio State University · USUniversity of Iowa · USUniversity of Maryland, Baltimore · US

Funding

Combining epidemiologic designs to model genetic risks for psychiatric disordersR01MH086117 · NIMH · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI VIELAND, VERONICA J. · 2009 to 2011
$2.7M
NIMH NIH HHS MH086117NIMH NIH HHS R01 MH086117
6 · The paper itself

Abstract

This paper describes the software package KELVIN, which supports the PPL (posterior probability of linkage) framework for the measurement of statistical evidence in human (or more generally, diploid) genetic studies. In terms of scope, KELVIN supports two-point (trait-marker or marker-marker) and multipoint linkage analysis, based on either sex-averaged or sex-specific genetic maps, with an option to allow for imprinting; trait-marker linkage disequilibrium (LD), or association analysis, in case-control data, trio data, and/or multiplex family data, with options for joint linkage and trait-marker LD or conditional LD given linkage; dichotomous trait, quantitative trait and quantitative trait threshold models; and certain types of gene-gene interactions and covariate effects. Features and data (pedigree) structures can be freely mixed and matched within analyses. The statistical framework is specifically tailored to accumulate evidence in a mathematically rigorous way across multiple data sets or data subsets while allowing for multiple sources of heterogeneity, and KELVIN itself utilizes sophisticated software engineering to provide a powerful and robust platform for studying the genetics of complex disorders.

Indexed as

Genetic LinkageModels, StatisticalSoftwareChromosome MappingEpistasis, GeneticGenomic ImprintingHumansLinkage DisequilibriumModels, GeneticPedigreeQuantitative Trait Loci

Identifiers

PMID22189470
PMCPMC3267994
OpenAlexW2039326703

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.