Evidence map›Paper›PMID 22189356›Full record

ArticleGenes and immunity2012

Role of MYH9 and APOL1 in African and non-African populations with lupus nephritis.

C P Lin, I Adrianto, C J Lessard, J A Kelly, K M Kaufman, J M Guthridge, B I Freedman, J-M Anaya, M E Alarcón-Riquelme, BIOLUPUS and GENLES Networks and 35 more

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 73 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Lupus Nephritis Biomarkers: A Critical Review.International journal of molecular sciences · 2024
    Review
  8. Article
  9. Article
  10. A Contemporary Update on the Diagnosis of Systemic Lupus Erythematosus.Clinical reviews in allergy & immunology · 2022
    Review
  11. Transcriptome Studies in Lupus Nephritis.Archivum immunologiae et therapiae experimentalis · 2022
    Review
  12. Systemic lupus erythematosus as a genetic disease.Clinical immunology (Orlando, Fla.) · 2022
    Article
  13. Lupus Nephritis: Current Perspectives and Moving Forward.Journal of inflammation research · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Lupus nephritis.Nature reviews. Disease primers · 2020
    Review
  18. Precision medicine in lupus nephritis: can biomarkers get us there?Translational research : the journal of laboratory and clinical medicine · 2018
    Review
  19. Genetics of human lupus nephritis.Clinical immunology (Orlando, Fla.) · 2017
    Review
  20. A systems approach to renal inflammation in SLE.Clinical immunology (Orlando, Fla.) · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors at 19 institutions in 7 countries.

C P LinArthritis and Clinical Immunology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.
I Adrianto
C J Lessard
J A Kelly
K M Kaufman
J M Guthridge
B I Freedman
J-M Anaya
M E Alarcón-Riquelme
BIOLUPUS and GENLES Networks
B A Pons-Estel
J Martin
S Glenn
A Adler
S-C Bae
S-Y Park
S-Y Bang
Y-W Song
S A Boackle
E E Brown
J C Edberg
G S Alarcón
M A Petri
L A Criswell
R Ramsey-Goldman
J D Reveille
L M Vila
G S Gilkeson
D L Kamen
J Ziegler
C O Jacob
A Rasmussen
J A James
R P Kimberly
J T Merrill
T B Niewold
R H Scofield
A M Stevens
B P Tsao
T J Vyse
C D Langefeld
K L Moser
J B Harley
P M Gaffney
C G Montgomery
Oklahoma Medical Research Foundation · USMedical University of South Carolina · USUniversity of Alabama at Birmingham · USCincinnati Children's Hospital Medical Center · USConsejo Superior de Investigaciones Científicas · ESHanyang University Seoul Hospital · KRJohns Hopkins University · USNorthwestern University · USUniversity of California, Los Angeles · USUniversity of Southern California · USKing's College London · GBSeattle Children's Hospital · USSeoul National University · KRSeoul National University Hospital · KRUnited States Department of Veterans Affairs · USUniversidad de Granada · ESUniversidad del Rosario · COUniversity of Puerto Rico System · PRWake Forest University · US

Funding

UCSF CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR024131 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSTON, S. CLAIBORNE · 2006 to 2011
$111.2M
Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
INSTITUTE FOR TRANSLATIONAL HEALTH SCIENCE (UL1): BPCAUL1RR025014 · NCRR · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2007 to 2011
$51.5M
ZD1839 FOR MALIGNANT ASTROCYTOMA OR GLIOBLASTOMA AND MENINGIOMAM01RR000079 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KESSLER, DAVID A · 1985 to 2006
$26.0M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
THE EFFECTS OF ERK PATHWAY INHIBITION ON DNA METHYLATION IN SLEP20RR015577 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI CENTOLA, MICHAEL B · 2000 to 2009
$21.5M
VALIDATING NOVEL GENES IMPLICATED IN LEUKOCYTE CHEMOTAXISP20RR020143 · NCRR · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2004 to 2011
$21.0M
Colorado Clinical and Translational Science Institute (UL1)UL1TR000154 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2012 to 2013
$20.4M
Program Project in the Genetics of SLEP01AR049084 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KIMBERLY, ROBERT P. · 2002 to 2012
$12.7M
The Interplay of Sociodemographic and Genetic Factors in SLE Health DisparitiesP60AR053308 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI YELIN, EDWARD H · 2006 to 2016
$11.8M
SOUTH CAROLINA CLINICAL & TRANSLATIONAL RESEARCH INSTITUTE (SCTR)UL1RR029882 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI BRADY, KATHLEEN T. · 2009 to 2011
$10.1M
Arthritis Research UKNCATS NIH HHS UL1 TR000154NCI NIH HHS R01 CA141700NCI NIH HHS R01CA141700NCRR NIH HHS M01 RR000079NCRR NIH HHS M01 RR-00079NCRR NIH HHS P20 RR015577NCRR NIH HHS P20 RR020143NCRR NIH HHS P30 RR031152NCRR NIH HHS UL1 RR024131NCRR NIH HHS UL1 RR024999NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1 RR025014NCRR NIH HHS UL1 RR025741NCRR NIH HHS UL1RR025741NCRR NIH HHS UL1 RR029882NCRR NIH HHS ULI RR025014-02NIAID NIH HHS K08 AI083790NIAID NIH HHS K24 AI078004NIAID NIH HHS L30 AI071651NIAID NIH HHS LRP AI071651NIAID NIH HHS N01 AI050026NIAID NIH HHS P01 AI083194NIAID NIH HHS R01 AI063274NIAID NIH HHS R21 AI070304NIAID NIH HHS R37 AI024717NIAID NIH HHS U19 AI082714NIAMS NIH HHS K24 AR002138NIAMS NIH HHS N01 AR062277NIAMS NIH HHS N01 AR62277NIAMS NIH HHS P01 AR049084NIAMS NIH HHS P01 AR49084NIAMS NIH HHS P30 AR048311NIAMS NIH HHS P30 AR053483NIAMS NIH HHS P30 AR055385NIAMS NIH HHS P60-2 AR30692NIAMS NIH HHS P60 AR030692NIAMS NIH HHS P60 AR049459NIAMS NIH HHS P60 AR053308NIAMS NIH HHS P60 AR062755NIAMS NIH HHS R01 AR033062NIAMS NIH HHS R01 AR042460NIAMS NIH HHS R01 AR043274NIAMS NIH HHS R01 AR043727NIAMS NIH HHS R01 AR043814NIAMS NIH HHS R01 AR051545NIAMS NIH HHS R01AR051545-01A2NIAMS NIH HHS R01 AR055240NIAMS NIH HHS R01 AR056360NIAMS NIH HHS R01 AR057172NIAMS NIH HHS R01 AR33062NIAMS NIH HHS R01 AR43814NIAMS NIH HHS RC1 AR058554NIAMS NIH HHS RC1 AR058621NIAMS NIH HHS RC1 AR05884NIDCR NIH HHS R01 DE018209NIDDK NIH HHS R01 DK070941NIGMS NIH HHS P30 GM103510PHS HHS R37 24717Wellcome Trust
6 · The paper itself

Abstract

Systemic lupus erythematosus (SLE) is a complex autoimmune disease characterized by autoantibody production and organ damage. Lupus nephritis (LN) is one of the most severe manifestations of SLE. Multiple studies reported associations between renal diseases and variants in the non-muscle myosin heavy chain 9 (MYH9) and the neighboring apolipoprotein L 1 (APOL1) genes. We evaluated 167 variants spanning MYH9 for association with LN in a multiethnic sample. The two previously identified risk variants in APOL1 were also tested for association with LN in European-Americans (EAs) (N = 579) and African-Americans (AAs) (N = 407). Multiple peaks of association exceeding a Bonferroni corrected P-value of P < 2.03 × 10(-3) were observed between LN and MYH9 in EAs (N = 4620), with the most pronounced association at rs2157257 (P = 4.7 × 10(-4), odds ratio (OR) = 1.205). A modest effect with MYH9 was also detected in Gullah (rs8136069, P = 0.0019, OR = 2.304). No association between LN and MYH9 was found in AAs, Asians, Amerindians or Hispanics. This study provides the first investigation of MYH9 in LN in non-Africans and of APOL1 in LN in any population, and presents novel insight into the potential role of MYH9 in LN in EAs.

Indexed as

Apolipoprotein L1ApolipoproteinsBlack or African AmericanGenetic Predisposition to DiseaseHumansLinkage DisequilibriumLipoproteins, HDLLupus NephritisMolecular Motor ProteinsMyosin Heavy ChainsPolymorphism, Single NucleotideWhite PeopleAPOL1 protein, humanApolipoprotein L1ApolipoproteinsLipoproteins, HDLMolecular Motor ProteinsMYH9 protein, humanMyosin Heavy Chains

Identifiers

PMID22189356
PMCPMC3330160
OpenAlexW1979897867

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.