Evidence map›Paper›PMID 22189110›Full record

ArticleJournal of clinical microbiology2012

Detection and measurement of fungal burden in a guinea pig model of invasive pulmonary aspergillosis by novel quantitative nested real-time PCR compared with galactomannan and (1,3)-β-D-glucan detection.

Martina Lengerova, Iva Kocmanova, Zdenek Racil, Kristyna Hrncirova, Sarka Pospisilova, Jiri Mayer, Laura K Najvar, Nathan P Wiederhold, William R Kirkpatrick, Thomas F Patterson

Open access · bronzeAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Journal of clinical microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Animal Models of Aspergillosis.Comparative medicine · 2018
    Review
  5. Rodent Models of Invasive Aspergillosis due toFrontiers in microbiology · 2017
    Review
  6. Article
  7. Article
  8. Antifungal pharmacokinetics and pharmacodynamics.Cold Spring Harbor perspectives in medicine · 2014
    Review
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Martina LengerovaDepartment of Internal Medicine—Hematooncology, Faculty of Medicine of Masaryk University and University Hospital Brno, Brno, Czech Republica. mlengerova@fnbrno.cz
Iva Kocmanova
Zdenek Racil
Kristyna Hrncirova
Sarka Pospisilova
Jiri Mayer
Laura K Najvar
Nathan P Wiederhold
William R Kirkpatrick
Thomas F Patterson
University Hospital Brno · CZMasaryk University · CZSouth Texas Veterans Health Care System · USThe University of Texas Health Science Center at San Antonio · USCentral European Institute of Technology – Masaryk University · CZ

Funding

NIAID NIH HHS N01 AI030041
6 · The paper itself

Abstract

We developed and assessed the diagnostic value of a novel quantitative nested real-time (QNRT) PCR assay targeting the internal transcribed spacer region of ribosomal DNA (rDNA) in a guinea pig model of invasive pulmonary aspergillosis. Groups of 5 immunosuppressed animals that were infected using an aerosol chamber with Aspergillus fumigatus conidia were humanely terminated 1 h postinoculation and at days 3, 5, 7, and 11 postchallenge, and lung tissue, bronchoalveolar lavage (BAL) fluid, whole blood, and serum samples were collected. The QNRT PCR results obtained with the serum and BAL fluid were compared to those achieved with galactomannan and (1→3)-β-d-glucan assays. High fungal burden levels were detected by QNRT PCR in both lung tissue and BAL fluid in all infected animals at each time point, and the sensitivity of each assay in BAL fluid was 100% by day 3 and remained so through the remainder of the study. The sensitivity of detection of fungi in whole blood and serum samples was significantly lower, and some samples remained negative by all three assays despite the advanced stage of the infection. From these data, we can conclude that this novel QNRT PCR method was highly sensitive for the detection of A. fumigatus from different types of samples in this model. In addition, BAL fluid samples appeared to be the most suitable for the early diagnosis of invasive pulmonary aspergillosis. When testing serum, the use of a combination of available assays may increase the possibility of early detection of this opportunistic mycosis.

Indexed as

AnimalsAspergillus fumigatusbeta-GlucansBronchoalveolar Lavage FluidColony Count, MicrobialDisease Models, AnimalDNA, FungalDNA, Ribosomal SpacerGalactoseGuinea PigsInvasive Pulmonary AspergillosisLungMaleMannansMycologyPolymerase Chain Reactionbeta-GlucansDNA, FungalDNA, Ribosomal SpacergalactomannanGalactoseMannanspolysaccharide-KProteoglycans

Identifiers

PMID22189110
PMCPMC3295131
OpenAlexW2032909235

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.