Evidence map›Paper›PMID 22189103›Full record

ArticleNucleic acids research2012

Single-pot enzymatic synthesis of Dicer-substrate siRNAs.

Keelan Z Guiley, Ashley J Pratt, Ian J MacRae

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. RNAi-Based Therapeutics and Novel RNA Bioengineering Technologies.The Journal of pharmacology and experimental therapeutics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Keelan Z GuileyDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, CA, USA.
Ashley J Pratt
Ian J MacRae
Scripps Research Institute · US

Funding

Structure and Mechanism of the RISC-loading ComplexR01GM086701 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI MACRAE, IAN JOHN · 2009 to 2013
$1.8M
NIGMS NIH HHS R01 GM086701NIGMS NIH HHS R01GM086701
6 · The paper itself

Abstract

We describe an inexpensive and efficient method for generating functional pools of Dicer-substrate small interfering RNAs (siRNAs) in a single reaction tube. The method exploits a highly active form of the enzyme Dicer from Giardia lamblia, which is capable of accurately processing double-stranded RNA (dsRNA) into 25-27 nt RNA pools during in vitro transcription. The small RNAs produced function as substrates of human Dicer in vitro and induce gene silencing with potency equivalent to traditional siRNAs when introduced into mammalian cells. The overall reaction is simple, can be carried out in any laboratory with access to a PCR machine, and is amenable to high-throughput processes.

Indexed as

AnimalsCell LineDEAD-box RNA HelicasesGene SilencingGenes, ReporterGiardia lambliaHumansLuciferasesRibonuclease IIIRNA, Small InterferingTranscription, GeneticDEAD-box RNA HelicasesDICER1 protein, humanLuciferasesRibonuclease IIIRNA, Small Interfering

Identifiers

PMID22189103
PMCPMC3299999
OpenAlexW2112430681

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.