Evidence map›Paper›PMID 22184412›Full record

ArticleInfection and immunity2012

Use of the chinchilla model for nasopharyngeal colonization to study gene expression by Moraxella catarrhalis.

Todd C Hoopman, Wei Liu, Stephanie N Joslin, Christine Pybus, Jennifer L Sedillo, Maria Labandeira-Rey, Cassie A Laurence, Wei Wang, James A Richardson, Lauren O Bakaletz and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Gene Expression Regulation in Airway Pathogens: Importance for Otitis Media.Frontiers in cellular and infection microbiology · 2022
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Panel 4: Report of the Microbiology Panel.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2017
    Review
  7. Panel 6: Vaccines.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2017
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Todd C HoopmanDepartment of Microbiology, University of Texas Southwestern, Medical Center, Dallas, Texas, USA.
Wei Liu
Stephanie N Joslin
Christine Pybus
Jennifer L Sedillo
Maria Labandeira-Rey
Cassie A Laurence
Wei Wang
James A Richardson
Lauren O Bakaletz
Eric J Hansen
Pulmonary and Critical Care Associates · USThe University of Texas Southwestern Medical Center · US

Funding

INTEGRATIVE IMMUNOLOGY TRAINING PROGRAMT32AI005284 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Nan Yan · 2003 to 2026
$7.4M
MOLECULAR MICROBIOLOGY TRAINING GRANTT32AI007520 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Julie K Pfeiffer · 1997 to 2026
$7.0M
SURFACE PROTEINS OF MORAXELLA CATARRHALISR01AI036344 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI HANSEN, ERIC JOHN · 1996 to 2013
$3.6M
Gene Expression by Moraxella catarrhalis in vivoK08AI076365 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI HOOPMAN, TODD C · 2008 to 2010
$324k
NIAID NIH HHS 5-T32-AI005284NIAID NIH HHS 5-T32-AI007520NIAID NIH HHS AI036344NIAID NIH HHS AI076365NIAID NIH HHS K08 AI076365NIAID NIH HHS R01 AI036344NIAID NIH HHS T32 AI005284NIAID NIH HHS T32 AI007520
6 · The paper itself

Abstract

Young adult chinchillas were atraumatically inoculated with Moraxella catarrhalis via the nasal route. Detailed histopathologic examination of nasopharyngeal tissues isolated from these M. catarrhalis-infected animals revealed the presence of significant inflammation within the epithelium. Absence of similar histopathologic findings in sham-inoculated animals confirmed that M. catarrhalis was exposed to significant host-derived factors in this environment. Twenty-four hours after inoculation, viable M. catarrhalis organisms were recovered from the nasal cavity and nasopharynx of the animals in numbers sufficient for DNA microarray analysis. More than 100 M. catarrhalis genes were upregulated in vivo, including open reading frames (ORFs) encoding proteins that are involved in a truncated denitrification pathway or in the oxidative stress response, as well as several putative transcriptional regulators. Additionally, 200 M. catarrhalis genes were found to be downregulated when this bacterium was introduced into the nasopharynx. These downregulated genes included ORFs encoding several well-characterized M. catarrhalis surface proteins including Hag, McaP, and MchA1. Real-time reverse transcriptase PCR (RT-PCR) was utilized as a stringent control to validate the results of in vivo gene expression patterns as measured by DNA microarray analysis. Inactivation of one of the genes (MC ORF 1550) that was upregulated in vivo resulted in a decrease in the ability of M. catarrhalis to survive in the chinchilla nasopharynx over a 3-day period. This is the first evaluation of global transcriptome expression by M. catarrhalis cells in vivo.

Indexed as

Gene Expression Regulation, BacterialHost-Pathogen InteractionsAnimalsChinchillaDisease Models, AnimalGene Expression ProfilingHistocytochemistryMaleMicroarray AnalysisMoraxella catarrhalisMoraxellaceae InfectionsNasopharynxReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain Reaction

Identifiers

PMID22184412
PMCPMC3294655
OpenAlexW2158039310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.