Evidence map›Paper›PMID 22180767›Full record

ReviewCurrent opinion in virology2011

Virus-derived siRNAs and piRNAs in immunity and pathogenesis.

Shou-Wei Ding, Rui Lu

Abstract readReview
In one paragraph

Review in Current opinion in virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
11.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Differential expression of microRNAs in response toFrontiers in plant science · 2024
    Article
  6. Infection Defects of RNA and DNA Viruses Induced by Antiviral RNA Interference.Microbiology and molecular biology reviews : MMBR · 2023
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Non-Coding RNAs in Response to Drought Stress.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Shou-Wei DingDepartment of Plant Pathology & Microbiology, and Institute for Integrative Genome Biology, University of California, Riverside, CA 92521, United States. shou-wei.ding@ucr.edu
Rui Lu
Louisiana State University · USUniversity of California, Riverside · US

Funding

Gene Silencing as an Antiviral Defense in Animal CellsR01AI052447 · NIAID · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DING, SHOU-WEI · 2003 to 2016
$6.0M
Genetic dissection of the RNAi-mediated antiviral immunity in C. elegansR01GM094396 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DING, SHOU-WEI · 2010 to 2013
$1.1M
Virus discovery by deep sequencing and assembly of virus-derived siRNAsRC1GM091896 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI DING, SHOU-WEI · 2009 to 2010
$1.0M
Cytosolic virus detection in Caenorhabditis elegansR56AI107249 · NIAID · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI LU, RUI · 2014 to 2014
$230k
The functional role of DRH-1 in RNAi directed viral immunityR03AI092159 · NIAID · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI LU, RUI · 2012 to 2013
$148k
NIAID NIH HHS R01 AI052447NIAID NIH HHS R03 AI092159NIAID NIH HHS R56 AI107249NIGMS NIH HHS GM094396NIGMS NIH HHS R01 GM094396NIGMS NIH HHS RC1 GM091896
6 · The paper itself

Abstract

Cellular organisms have evolved related pathways for the biogenesis and function of small interfering RNAs (siRNAs), microRNAs and PIWI-interacting RNAs (piRNAs). These distinct classes of small RNAs guide specific gene silencing at both transcriptional and posttranscriptional levels by serving as specificity determinants. Small RNAs of virus and host origins have been found to modulate virus–host interactions by RNA interference (RNAi), leading to antiviral immunity or viral pathogenesis. Deep sequencing-based profiling of virus-derived small RNAs as products of host immune recognition not only allowed us to gain insight into the expansion and functional specialization of host factors involved in the antiviral immunity but also made it possible to identify new viruses in a culture-independent manner. Here we review recent developments on the characterization and function of virus-derived siRNAs and piRNAs in eukaryotic hosts.

Indexed as

AnimalsCaenorhabditis elegansDisease Models, AnimalDrosophilaGene SilencingHumansRNA, Small InterferingVirus DiseasesVirusesRNA, Small Interfering

Identifiers

PMID22180767
PMCPMC3237678
OpenAlexW2002658022

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.