Evidence map›Paper›PMID 22180026›Full record

ArticleAmino acids2012

Detection of transglutaminase activity using click chemistry.

Remon van Geel, Marjoke F Debets, Dennis W P M Löwik, Ger J M Pruijn, Wilbert C Boelens

Abstract read
In one paragraph

Article in Amino acids, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  3. Review
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Remon van GeelDepartment of Biomolecular Chemistry, Nijmegen Centre for Molecular Life Sciences, Institute for Molecules and Materials and Netherlands Proteomics Centre, Radboud University, Nijmegen, The Netherlands.
Marjoke F Debets
Dennis W P M Löwik
Ger J M Pruijn
Wilbert C Boelens

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transglutaminase 2 (TG2) is a Ca(2+)-dependent enzyme able to catalyze the formation of ε(γ-glutamyl)-lysine crosslinks between polypeptides, resulting in high molecular mass multimers. We have developed a bioorthogonal chemical method for the labeling of TG2 glutamine-donor proteins. As amine-donor substrates we used a set of azide- and alkyne-containing primary alkylamines that allow, after being crosslinked to glutamine-donor proteins, specific labeling of these proteins via the azide-alkyne cycloaddition. We demonstrate that these azide- and alkyne-functionalized TG2 substrates are cell permeable and suitable for specific labeling of TG2 glutamine-donor substrates in HeLa and Movas cells. Both the Cu(I)-catalyzed and strain promoted azide-alkyne cycloaddition proved applicable for subsequent derivatization of the TG2 substrate proteins with the desired probe. This new method for labeling TG2 substrate proteins introduces flexibility in the detection and/or purification of crosslinked proteins, allowing differential labeling of cellular proteins.

Indexed as

Click ChemistryAcylationAlkynesAminesAmino Acid SequenceAnimalsAzidesBiocatalysisBiotinCadaverineCell MembraneCross-Linking ReagentsCycloaddition ReactionEnzyme InhibitorsFluorescein-5-isothiocyanateFluorescent Dyes5-(biotinamido)pentylamineAlkynesAminesAzidesBiotinCadaverineCross-Linking ReagentsEnzyme InhibitorsFluorescein-5-isothiocyanateFluorescent DyesGTP-Binding ProteinsHSP20 Heat-Shock ProteinsHSPB6 protein, humanPeptide FragmentsProtein Glutamine gamma Glutamyltransferase 2Transglutaminases

Identifiers

PMID22180026
PMCPMC3418501

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.