Evidence map›Paper›PMID 22179305›Full record

ArticlePlant cell reports2012

Fine mapping of a major QTL for flag leaf width in rice, qFLW4, which might be caused by alternative splicing of NAL1.

Mingliang Chen, Ju Luo, Gaoneng Shao, Xiangjin Wei, Shaoqing Tang, Zhonghua Sheng, Jian Song, Peisong Hu

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Article in Plant cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

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34citing papers in PubMed
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3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
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  11. Fine mapping of QFlw-5B, a major QTL for flag leaf width in common wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Yield-enhancing SPIKE allele from theJournal of genetics · 2021
    Article
  16. A Novel Mutation of theInternational journal of molecular sciences · 2020
    Article
  17. Article
  18. Article
  19. Enhanced Expression of QTLInternational journal of molecular sciences · 2019
    Article
  20. Construction of introgression lines of Oryza rufipogon and evaluation of important agronomic traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Mingliang ChenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Ju Luo
Gaoneng Shao
Xiangjin Wei
Shaoqing Tang
Zhonghua Sheng
Jian Song
Peisong Hu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf width is an important agricultural trait in rice. QTL mapping in a recombinant inbred line population derived from the cross between the javanica cultivar D50 (narrow-leaved) and the indica cultivar HB277 (wide-leaved) identified five QTLs controlling flag leaf width. Fine mapping of the major QTL qFLW4 narrowed its location to a 74.8 kb interval between the SSR loci RM17483 and RM17486, a region which also contains the gene NAL1 (Narrow leaf 1). There was no difference in the level of NAL1 expression between cvs. D50 and HB277, but an analysis of the NAL1 transcripts showed that while most (if not all) of those produced in cv. D50 were full-length, two-thirds of those in HB277 were non-functional due to either loss or gain of sequence. The inference was that NAL1 is probably synonymous with qFLW4, and that the functional difference between the two alleles was due to alternative splicing. The analysis of expression of other known genes involved in the determination of leaf width provided no evidence of their having any clear functional association with qFLW4/NAL1.

Indexed as

Alternative SplicingChromosome MappingQuantitative Trait LociBase SequenceCrosses, GeneticDNA, PlantGenes, PlantMolecular Sequence DataOryzaPlant LeavesDNA, Plant

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.