Evidence map›Paper›PMID 22174812›Full record

ArticlePloS one2011

Metabolic and miRNA profiling of TMV infected plants reveals biphasic temporal changes.

Ariel A Bazzini, Carlos A Manacorda, Takayuki Tohge, Gabriela Conti, Maria C Rodriguez, Adriano Nunes-Nesi, Sofía Villanueva, Alisdair R Fernie, Fernando Carrari, Sebastian Asurmendi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. The3 Biotech · 2022
    Article
  6. MicroRNA398: A Master Regulator of Plant Development and Stress Responses.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Microarray analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  12. Article
  13. Transcriptomic changes in3 Biotech · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Ariel A BazziniInstituto de Biotecnología, CICVyA-INTA, Hurlingham, Buenos Aires, Argentina.
Carlos A Manacorda
Takayuki Tohge
Gabriela Conti
Maria C Rodriguez
Adriano Nunes-Nesi
Sofía Villanueva
Alisdair R Fernie
Fernando Carrari
Sebastian Asurmendi
Consejo Nacional de Investigaciones Científicas y Técnicas · ARMax Planck Institute of Molecular Plant Physiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant viral infections induce changes including gene expression and metabolic components. Identification of metabolites and microRNAs (miRNAs) differing in abundance along infection may provide a broad view of the pathways involved in signaling and defense that orchestrate and execute the response in plant-pathogen interactions. We used a systemic approach by applying both liquid and gas chromatography coupled to mass spectrometry to determine the relative level of metabolites across the viral infection, together with a miRs profiling using a micro-array based procedure. Systemic changes in metabolites were characterized by a biphasic response after infection. The first phase, detected at one dpi, evidenced the action of a systemic signal since no virus was detected systemically. Several of the metabolites increased at this stage were hormone-related. miRs profiling after infection also revealed a biphasic alteration, showing miRs alteration at 5 dpi where no virus was detected systemically and a late phase correlating with virus accumulation. Correlation analyses revealed a massive increase in the density of correlation networks after infection indicating a complex reprogramming of the regulatory pathways, either in response to the plant defense mechanism or to the virus infection itself. Our data propose the involvement of a systemic signaling on early miRs alteration.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantAmino AcidsGas Chromatography-Mass SpectrometryGene Regulatory NetworksMicroRNAsNicotianaPlant DiseasesPlant LeavesSignal TransductionStatistics, NonparametricTime FactorsTobacco Mosaic VirusAmino AcidsMicroRNAs

Identifiers

PMID22174812
PMCPMC3236191
OpenAlexW1992969749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.