Evidence map›Paper›PMID 22174649›Full record

ArticleInternational journal of molecular sciences2011

3,3'-diethylthiatricarbocyanine iodide: a highly sensitive chiroptical reporter of DNA helicity and sequence.

Jung Kyu Choi, Alessandro D'Urso, Mitch Trauernicht, Murtaza Shabbir-Hussain, Andrea E Holmes, Milan Balaz

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jung Kyu ChoiDepartment of Chemistry, University of Wyoming, Laramie, WY 82071, USA; E-Mails: jchoi4@uwyo.edu (J.K.C.); adurso@unict.it (A.D.); mshabbir@uwyo.edu (M.S.-H.).
Alessandro D'Urso
Mitch Trauernicht
Murtaza Shabbir-Hussain
Andrea E Holmes
Milan Balaz
Doane University · USUniversity of Wyoming · US

Funding

ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TURPEN, JAMES B · 2001 to 2011
$36.2M
Wyoming IDeA Networks of Biomedical Research ExcellenceP20RR016474 · NCRR · UNIVERSITY OF WYOMING · PI LIBERLES, DAVID A. · 2001 to 2011
$28.2M
NCRR NIH HHS P20 RR016469NCRR NIH HHS P20 RR016474
6 · The paper itself

Abstract

Using UV-vis absorption and circular dichroism (CD) spectroscopies, we explored the binding interactions of 3,3'-diethylthiatricarbocyanine iodide (Cy7) with polynucleotides of different sequences and helicity. CD showed to be a very diagnostic tool giving different spectroscopic chiroptical signatures for all explored DNA sequences upon Cy7 binding. Cy7 was able to spectroscopically discriminate between the right handed B-DNA of poly(dG-dC)(2) and its left handed Z-DNA counterpart induced by spermine or Co(III)hexamine via nearly opposite induced circular dichroic signal.

Indexed as

BenzothiazolesCarbocyaninesCircular DichroismDNA, B-FormDNA, Z-FormPolydeoxyribonucleotidesProtein BindingSequence Analysis, DNAStructure-Activity Relationship3,3'-diethylthiatricarbocyanineBenzothiazolesCarbocyaninesDNA, B-FormDNA, Z-Formindotricarbocyaninepoly(dC-dG)Polydeoxyribonucleotidescircular dichroismCy7 cyanine dyeDNA recognitionleft-handed Z-DNAsensing

Identifiers

PMID22174649
PMCPMC3233455
OpenAlexW2071459294

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.