Evidence map›Paper›PMID 22173636›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Candida albicans Dicer (CaDcr1) is required for efficient ribosomal and spliceosomal RNA maturation.

Douglas A Bernstein, Valmik K Vyas, David E Weinberg, Ines A Drinnenberg, David P Bartel, Gerald R Fink

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 53 citations in OpenAlex.

  1. RiboCop surveils pre-rRNA processing by Dicer in cellular quiescence.bioRxiv : the preprint server for biology · 2025
    Article
  2. Review
  3. Identification of an active RNAi pathway inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Disruption of theRNA (New York, N.Y.) · 2023
    Article
  6. Review
  7. Article
  8. On and Off: Epigenetic Regulation ofPathogens (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Dicer 1 ofVirusdisease · 2019
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Douglas A BernsteinWhitehead Institute for Biomedical Research, Cambridge, MA 02142, USA.
Valmik K Vyas
David E Weinberg
Ines A Drinnenberg
David P Bartel
Gerald R Fink
Whitehead Institute for Biomedical Research · USHoward Hughes Medical Institute · USMassachusetts Institute of Technology · US

Funding

The Role of Genetic Variation in the Fungal/Host InteractionR01GM040266 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI FINK, GERALD R · 1988 to 2012
$8.6M
RNA CONFORMATION AND CATALYSISR01GM061835 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI BARTEL, DAVID P · 2000 to 2008
$2.5M
RNA Conformation and CatalysisR37GM061835 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI BARTEL, DAVID P · 2011 to 2016
$2.3M
Howard Hughes Medical InstituteNIAID NIH HHS F32 AI729353NIGMS NIH HHS GM040266NIGMS NIH HHS GM061835NIGMS NIH HHS R01 GM040266NIGMS NIH HHS R01 GM061835NIGMS NIH HHS R37 GM061835
6 · The paper itself

Abstract

The generation of mature functional RNAs from nascent transcripts requires the precise and coordinated action of numerous RNAs and proteins. One such protein family, the ribonuclease III (RNase III) endonucleases, includes Rnt1, which functions in fungal ribosome and spliceosome biogenesis, and Dicer, which generates the siRNAs of the RNAi pathway. The recent discovery of small RNAs in Candida albicans led us to investigate the function of C. albicans Dicer (CaDcr1). CaDcr1 is capable of generating siRNAs in vitro and is required for siRNA generation in vivo. In addition, CaDCR1 complements a Dicer knockout in Saccharomyces castellii, restoring RNAi-mediated gene repression. Unexpectedly, deletion of the C. albicans CaDCR1 results in a severe slow-growth phenotype, whereas deletion of another core component of the RNAi pathway (CaAGO1) has little effect on growth, suggesting that CaDCR1 may have an essential function in addition to producing siRNAs. Indeed CaDcr1, the sole functional RNase III enzyme in C. albicans, has additional functions: it is required for cleavage of the 3' external transcribed spacer from unprocessed pre-rRNA and for processing the 3' tail of snRNA U4. Our results suggest two models whereby the RNase III enzymes of a fungal ancestor, containing both a canonical Dicer and Rnt1, evolved through a series of gene-duplication and gene-loss events to generate the variety of RNase III enzymes found in modern-day budding yeasts.

Indexed as

Evolution, MolecularCandida albicansFlow CytometryGene Expression Regulation, FungalModels, GeneticPhylogenyRibonuclease IIIRNA, MessengerRNA Processing, Post-TranscriptionalRNA, RibosomalSpliceosomesSyntenyRibonuclease IIIRNA, MessengerRNA, Ribosomal

Identifiers

PMID22173636
PMCPMC3258626
OpenAlexW2044465552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.