Evidence map›Paper›PMID 22171576›Full record

ArticleCancer science2012

Runx1 is a tumor suppressor gene in the mouse gastrointestinal tract.

Remond J A Fijneman, Rebecca A Anderson, Ethan Richards, Jieming Liu, Marianne Tijssen, Gerrit A Meijer, Janae Anderson, Annette Rod, Michael G O'Sullivan, Patricia M Scott and 1 more

Open access · greenAbstract read
In one paragraph

Article in Cancer science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Dysregulation of miR-1-3p: An Early Event in Colitis-Associated Dysplasia.International journal of molecular sciences · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. RUNX1 Dosage in Development and Cancer.Molecules and cells · 2020
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Lacrimal Gland Repair Using Progenitor Cells.Stem cells translational medicine · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Remond J A FijnemanDepartment of Pathology, VU University Medical Center, Amsterdam, Netherlands.
Rebecca A Anderson
Ethan Richards
Jieming Liu
Marianne Tijssen
Gerrit A Meijer
Janae Anderson
Annette Rod
Michael G O'Sullivan
Patricia M Scott
Robert T Cormier
University of Minnesota, Duluth · USAmsterdam UMC Location VUmc · NLUniversity of Minnesota · US

Funding

Pla2g2a, Runx1 and Colorectal Cancer RiskR03CA137756 · NCI · UNIVERSITY OF MINNESOTA · PI CORMIER, ROBERT T · 2008 to 2009
$188k
NCI NIH HHS CA137756-01NCI NIH HHS R03 CA137756
6 · The paper itself

Abstract

The Runx1 transcription factor plays an important role in tissue homeostasis through its effects on stem/progenitor cell populations and differentiation. The effect of Runx1 on epithelial differentiation of the secretory cell lineage of the colon was recently demonstrated. This study aimed to examine the role of Runx1 in tumor development in epithelial cells of the gastrointestinal tract. Conditional knockout mice that lacked Runx1 expression in epithelial cells of the GI tract were generated. These mice were crossed onto the Apc(Min) background, killed and their intestinal tumor phenotypes were compared with Apc(Min) Runx1 wild-type control mice. Apc-wild-type Runx1-mutant mice were also examined for tumor development. Colons from Runx1 knockout and wild-type mice were used for genome-wide mRNA expression analyses followed by gene-specific quantitative RT-PCR of whole colon and colon epithelium to identify Runx1 target genes. Runx1 deficiency in intestinal epithelial cells significantly enhanced tumorigenesis in Apc(Min) mice. Notably, epithelial Runx1 deficiency in Apc-wild-type mice was sufficient to cause tumor development. Absence of Runx1 was associated with global changes in the expression of genes involved in inflammation and intestinal metabolism, and with gene sets indicative of a metastatic phenotype and poor prognosis. Gene-specific analysis of Runx1-deficient colon epithelium revealed increased expression of genes linked to an expansion of the stem/progenitor cell population. These results identify Runx1 as a novel tumor suppressor gene for gastrointestinal tumors and support a role for Runx1 in maintaining the balance between the intestinal stem/progenitor cell population and epithelial differentiation of the GI tract.

Indexed as

Genes, Tumor SuppressorAnimalsCore Binding Factor Alpha 2 SubunitFemaleGastrointestinal NeoplasmsGastrointestinal TractGene Expression ProfilingIntestinal MucosaMaleMiceMice, Inbred C57BLMice, KnockoutOligonucleotide Array Sequence AnalysisReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionStem CellsCore Binding Factor Alpha 2 SubunitRunx1 protein, mouse

Identifiers

PMID22171576
PMCPMC5439111
OpenAlexW2153316451

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.