Evidence map›Paper›PMID 22171279›Full record

ArticleJournal of virology2012

Productive replication and evolution of HIV-1 in ferret cells.

Hind J Fadel, Dyana T Saenz, Rebekah Guevara, Veronika von Messling, Mary Peretz, Eric M Poeschla

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Hind J FadelDepartment of Molecular Medicine, Mayo Clinic College of Medicine, Rochester, Minnesota, USA.
Dyana T Saenz
Rebekah Guevara
Veronika von Messling
Mary Peretz
Eric M Poeschla
Mayo Clinic · USInstitut National de la Recherche Scientifique · CA

Funding

LEDGF/p7 and HIV IntegrationR01AI077344 · NIAID · UNIVERSITY OF COLORADO DENVER · PI POESCHLA, ERIC M. · 2008 to 2018
$4.1M
NOVEL LENTIVIRAL VECTORS FOR SUSTAINED GENE EXPRESSIONR01AI047536 · NIAID · MAYO CLINIC ROCHESTER · PI POESCHLA, ERIC M. · 1999 to 2008
$1.8M
Lentiviral Genome ProcessingR21AI047536 · NIAID · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI POESCHLA, ERIC M. · 2003 to 2003
$292k
NIAID NIH HHS AI47536NIAID NIH HHS AI77344NIAID NIH HHS R01 AI047536NIAID NIH HHS R01 AI077344NIAID NIH HHS R21 AI047536
6 · The paper itself

Abstract

A rodent or other small animal model for HIV-1 has not been forthcoming, with the principal obstacles being species-specific restriction mechanisms and deficits in HIV-1 dependency factors. Some Carnivorans may harbor comparatively fewer impediments. For example, in contrast to mice, the domestic cat genome encodes essential nonreceptor HIV-1 dependency factors. All Feliformia species and at least one Caniformia species also lack a major lentiviral restriction mechanism (TRIM5α/TRIMCyp proteins). Here we investigated cells from two species in another carnivore family, the Mustelidae, for permissiveness to the HIV-1 life cycle. Mustela putorius furo (domesticated ferret) primary cells and cell lines did not restrict HIV-1, feline immunodeficiency virus (FIV), equine infectious anemia virus (EIAV), or N-tropic murine leukemia virus (MLV) postentry and supported late HIV-1 life cycle steps comparably to human cells. The ferret TRIM5α gene exon 8, which encodes the B30.2 domain, was found to be pseudogenized. Strikingly, ferret (but not mink) cells engineered to express human HIV-1 entry receptors supported productive spreading replication, amplification, and serial passage of wild-type HIV-1. Nevertheless, produced virions had relatively reduced infectivity and the virus accrued G→A hypermutations, consistent with APOBEC3 protein pressure. Ferret cell-passaged HIV-1 also evolved amino acid changes in the capsid cyclophilin A binding loop. We conclude that the genome of this carnivore can provide essential nonreceptor HIV-1 dependency factors and that ferret APOBEC3 proteins with activity against HIV-1 are likely. Even so, unlike in cat cells, HIV-1 can replicate in ferret cells without vif substitution. The virus evolves in this novel nonprimate cell adaptive landscape. We suggest that further characterization of HIV-1 adaptation in ferret cells and delineation of Mustelidae restriction factor repertoires are warranted, with a view to the potential for an HIV-1 animal model.

Indexed as

Biological EvolutionDisease Models, AnimalFerretsAnimalsCell LineHIV-1HIV InfectionsHumansMinkMolecular Sequence DataVirus CultivationVirus Replication

Identifiers

PMID22171279
PMCPMC3302389
OpenAlexW2120593687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.