Evidence map›Paper›PMID 22167683›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2012

Assignment of backbone resonances in a eukaryotic protein kinase - ERK2 as a representative example.

Andrea Piserchio, Kevin N Dalby, Ranajeet Ghose

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Dynamics-Driven Allostery in Protein Kinases.Trends in biochemical sciences · 2015
    Review
  2. Article
  3. Molecular basis of MAP kinase regulation.Protein science : a publication of the Protein Society · 2013
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Andrea PiserchioDepartment of Chemistry, The City College of New York, New York, NY, USA.
Kevin N Dalby
Ranajeet Ghose

Funding

TNC FUNCTION IN APOPTOTIC ANTIGEN DRIVEN AUTOIMMUNITYG12RR003060 · NCRR · CITY COLLEGE OF NEW YORK · PI WALLMAN, JOSHUA · 1985 to 2011
$26.1M
Cellular/Molecular Basis of Development: Research CenterG12MD007603 · NIMHD · CITY COLLEGE OF NEW YORK · PI PEZZANO, MARK · 2012 to 2017
$11.5M
Mechanism and Specificity of MAP KinasesR01GM059802 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI DALBY, KEVIN N · 2001 to 2011
$2.3M
Catalytic Domain Dynamics in Protein KinasesR01GM084278 · NIGMS · CITY COLLEGE OF NEW YORK · PI GHOSE, RANAJEET · 2009 to 2013
$1.6M
NCRR NIH HHS 5G12 RR03060NCRR NIH HHS G12 RR003060NIGMS NIH HHS GM059802NIGMS NIH HHS GM084278NIGMS NIH HHS R01 GM059802NIGMS NIH HHS R01 GM084278NIMHD NIH HHS G12 MD007603
6 · The paper itself

Abstract

A first step toward the analysis of the structure, dynamics, and interactions of proteins by NMR is obtaining an acceptable level of resonance assignments. This process is nontrivial in most eukaryotic kinases given their size and suboptimal behavior in solution. Using inactive ERK2 as a representative example, we describe the procedures we utilized to achieve a significant degree of completeness of backbone resonance assignment.

Indexed as

Models, MolecularProtein ConformationMitogen-Activated Protein Kinase 1Nuclear Magnetic Resonance, BiomolecularSpin LabelsMitogen-Activated Protein Kinase 1Spin Labels

Identifiers

PMID22167683
PMCPMC3305997

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.