Evidence map›Paper›PMID 22164304›Full record

ArticlePloS one2011

Persistent expression of hepatitis C virus non-structural proteins leads to increased autophagy and mitochondrial injury in human hepatoma cells.

Victor C Chu, Sayanti Bhattacharya, Ann Nomoto, Jiahui Lin, Syed Kashif Zaidi, Terry D Oberley, Steven A Weinman, Salman Azhar, Ting-Ting Huang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Reduced expression of the PER2 protein contributes to βActa biochimica et biophysica Sinica · 2025
    Article
  3. Article
  4. Autophagy in liver diseases.World journal of hepatology · 2021
    Review
  5. Review
  6. Article
  7. Review
  8. Diverse Functions of Autophagy in Liver Physiology and Liver Diseases.International journal of molecular sciences · 2019
    Review
  9. The Multifaceted Roles of Autophagy in Flavivirus-Host Interactions.International journal of molecular sciences · 2018
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Victor C ChuDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, California, United States of America.
Sayanti Bhattacharya
Ann Nomoto
Jiahui Lin
Syed Kashif Zaidi
Terry D Oberley
Steven A Weinman
Salman Azhar
Ting-Ting Huang
Stanford University · USVA Palo Alto Health Care System · USGeriatric Research Education and Clinical Center · USUniversity of Kansas Medical Center · USWilliam S. Middleton Memorial Veterans Hospital · US

Funding

Role of alcohol adapted Kupffer cells in the progression and resolution of ALDR01AA012863 · NIAAA · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI STEVEN A WEINMAN · 2000 to 2026
$10.2M
HOW DO CELLS PROCESS HIGH DENSITY LIPOPROTEINS?R01HL033881 · NHLBI · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI AZHAR, SALMAN · 1985 to 2014
$3.8M
Oxidative Stress and Hepatocellular CarcinomaR01CA122499 · NCI · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI HUANG, TING-TING · 2007 to 2011
$1.3M
Cells Processing High Density LipoproteinsR56HL033881 · NHLBI · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI AZHAR, SALMAN · 2015 to 2015
$347k
NCI NIH HHS CA122499NCI NIH HHS R01 CA122499NHLBI NIH HHS HL33881NHLBI NIH HHS R01 HL033881NHLBI NIH HHS R56 HL033881NIAAA NIH HHS AA012863NIAAA NIH HHS R01 AA012863
6 · The paper itself

Abstract

HCV infection is a major cause of chronic liver disease and liver cancer in the United States. To address the pathogenesis caused by HCV infection, recent studies have focused on the direct cytopathic effects of individual HCV proteins, with the objective of identifying their specific roles in the overall pathogenesis. However, this approach precludes examination of the possible interactions between different HCV proteins and organelles. To obtain a better understanding of the various cytopathic effects of and cellular responses to HCV proteins, we used human hepatoma cells constitutively replicating HCV RNA encoding either the full-length polyprotein or the non-structural proteins, or cells constitutively expressing the structural protein core, to model the state of persistent HCV infection and examined the combination of various HCV proteins in cellular pathogenesis. Increased reactive oxygen species (ROS) generation in the mitochondria, mitochondrial injury and degeneration, and increased lipid accumulation were common among all HCV protein-expressing cells regardless of whether they expressed the structural or non-structural proteins. Expression of the non-structural proteins also led to increased oxidative stress in the cytosol, membrane blebbing in the endoplasmic reticulum, and accumulation of autophagocytic vacuoles. Alterations of cellular redox state, on the other hand, significantly changed the level of autophagy, suggesting a direct link between oxidative stress and HCV-mediated activation of autophagy. With the wide-spread cytopathic effects, cells with the full-length HCV polyprotein showed a modest antioxidant response and exhibited a significant increase in population doubling time and a concomitant decrease in cyclin D1. In contrast, cells expressing the non-structural proteins were able to launch a vigorous antioxidant response with up-regulation of antioxidant enzymes. The population doubling time and cyclin D1 level were also comparable to that of control cells. Finally, the cytopathic effects of core protein appeared to focus on the mitochondria without remarkable disturbances in the cytosol.

Indexed as

AutophagyAnimalsAntibodiesAntioxidantsCarcinoma, HepatocellularCell LineCell Line, TumorCyclin D1GenomeHepacivirusHumansImmunohistochemistryLiver NeoplasmsMiceMice, TransgenicMitochondriaAntibodiesAntioxidantsCyclin D1

Identifiers

PMID22164304
PMCPMC3229600
OpenAlexW2004704734

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.