Evidence map›Paper›PMID 22164257›Full record

ArticlePloS one2011

Cup blocks the precocious activation of the orb autoregulatory loop.

Li Chin Wong, Paul Schedl

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Genetic and Epigenetic Regulation ofJournal of developmental biology · 2023
    Review
  4. Review
  5. Epithelial morphogenesis in theFrontiers in cell and developmental biology · 2022
    Article
  6. Mapping parameter spaces of biological switches.PLoS computational biology · 2021
    Article
  7. Review
  8. Review
  9. Coordinating Proliferation, Polarity, and Cell Fate in theFrontiers in cell and developmental biology · 2020
    Review
  10. TheGenetics · 2019
    Article
  11. Article
  12. RNA-binding profiles ofProceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  13. Article
  14. Review
  15. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Li Chin WongDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America. lichin.wong@nyumc.org
Paul Schedl
Princeton University · US

Funding

MOLECULAR AND GENETIC ANALYSIS OF CHROMATIN STRUCTURER01GM043432 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 1990 to 2017
$5.8M
ORB GENE FUNCTION IN TRANSLATIONAL REGULATIONR01GM056937 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 1999 to 2008
$1.5M
Molecular and Genetic Analysis of Chromatin StructureR56GM043432 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 2008 to 2008
$389k
NIGMS NIH HHS GM043432NIGMS NIH HHS GM56937NIGMS NIH HHS R01 GM043432NIGMS NIH HHS R01 GM056937NIGMS NIH HHS R56 GM043432
6 · The paper itself

Abstract

Translational regulation of localized mRNAs is essential for patterning and axes determination in many organisms. In the Drosophila ovary, the germline-specific Orb protein mediates the translational activation of a variety of mRNAs localized in the oocyte. One of the Orb target mRNAs is orb itself, and this autoregulatory activity ensures that Orb proteins specifically accumulate in the developing oocyte. Orb is an RNA-binding protein and is a member of the cytoplasmic polyadenylation element binding (CPEB) protein family. We report here that Cup forms a complex in vivo with Orb. We also show that cup negatively regulates orb and is required to block the precocious activation of the orb positive autoregulatory loop. In cup mutant ovaries, high levels of Orb accumulate in the nurse cells, leading to what appears to be a failure in oocyte specification as a number of oocyte markers inappropriately accumulate in nurse cells. In addition, while orb mRNA is mislocalized and destabilized, a longer poly(A) tail is maintained than in wild type ovaries. Analysis of Orb phosphoisoforms reveals that loss of cup leads to the accumulation of hyperphosphorylated Orb, suggesting that an important function of cup in orb-dependent mRNA localization pathways is to impede Orb activation.

Indexed as

Gene Expression RegulationProtein BiosynthesisAllelesAnimalsAnimals, Genetically ModifiedCells, CulturedCrosses, GeneticDrosophilaDrosophila ProteinsFemaleHeterozygoteMicroscopy, FluorescenceMutationOocytesPhenotypePhosphorylationcup protein, DrosophilaDrosophila Proteinsorb protein, Drosophilaosk protein, DrosophilaRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID22164257
PMCPMC3229553
OpenAlexW2071065467

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.