Evidence map›Paper›PMID 22160701›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

Structural basis for basal activity and autoactivation of abscisic acid (ABA) signaling SnRK2 kinases.

Ley-Moy Ng, Fen-Fen Soon, X Edward Zhou, Graham M West, Amanda Kovach, Kelly M Suino-Powell, Michael J Chalmers, Jun Li, Eu-Leong Yong, Jian-Kang Zhu and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  20. International journal of molecular sciences · 2022
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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ley-Moy NgLaboratory of Structural Sciences, Van Andel Research Institute, Grand Rapids, MI 49503, USA.
Fen-Fen Soon
X Edward Zhou
Graham M West
Amanda Kovach
Kelly M Suino-Powell
Michael J Chalmers
Jun Li
Eu-Leong Yong
Jian-Kang Zhu
Patrick R Griffin
Karsten Melcher
H Eric Xu

Funding

Acquisition of a LTQ/Orbitrap MS to advance the study of protein dynamicsS10RR027270 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI GRIFFIN, PATRICK ROBERT · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027270
6 · The paper itself

Abstract

Abscisic acid (ABA) is an essential hormone that controls plant growth, development, and responses to abiotic stresses. Central for ABA signaling is the ABA-mediated autoactivation of three monomeric Snf1-related kinases (SnRK2.2, -2.3, and -2.6). In the absence of ABA, SnRK2s are kept in an inactive state by forming physical complexes with type 2C protein phosphatases (PP2Cs). Upon relief of this inhibition, SnRK2 kinases can autoactivate through unknown mechanisms. Here, we report the crystal structures of full-length Arabidopsis thaliana SnRK2.3 and SnRK2.6 at 1.9- and 2.3-Å resolution, respectively. The structures, in combination with biochemical studies, reveal a two-step mechanism of intramolecular kinase activation that resembles the intermolecular activation of cyclin-dependent kinases. First, release of inhibition by PP2C allows the SnRK2s to become partially active because of an intramolecular stabilization of the catalytic domain by a conserved helix in the kinase regulatory domain. This stabilization enables SnRK2s to gain full activity by activation loop autophosphorylation. Autophosphorylation is more efficient in SnRK2.6, which has higher stability than SnRK2.3 and has well-structured activation loop phosphate acceptor sites that are positioned next to the catalytic site. Together, these data provide a structural framework that links ABA-mediated release of PP2C inhibition to activation of SnRK2 kinases.

Indexed as

Models, MolecularAbscisic AcidArabidopsisArabidopsis ProteinsCrystallizationEnzyme ActivationPhosphoprotein PhosphatasesPhosphorylationProtein Phosphatase 2CProtein Serine-Threonine KinasesSignal TransductionX-Ray DiffractionAbscisic AcidArabidopsis ProteinsPhosphoprotein PhosphatasesProtein Phosphatase 2CProtein Serine-Threonine KinasesSnRK2 protein, Arabidopsis

Identifiers

PMID22160701
PMCPMC3248506

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.