Evidence map›Paper›PMID 22160584›Full record

ArticleLipids2012

Involvement of liver X receptor alpha in histone modifications across the target fatty acid synthase gene.

Huihong Yu, Jinfeng Wu, Mei Yang, Jinjun Guo, Lili Zheng, Mingli Peng, Qin Zhang, Yingxia Xiang, Jie Cao, Wei Shen

Abstract read
PubMed Publisher
In one paragraph

Article in Lipids, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Histone H3K9 Demethylase JMJD2B Plays a Role in LXRα-Dependent Lipogenesis.International journal of molecular sciences · 2020
    Article
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Huihong YuDepartment of Digestive Diseases, The Second Affiliated Hospital, Chongqing Medical University, Chongqing, China.
Jinfeng Wu
Mei Yang
Jinjun Guo
Lili Zheng
Mingli Peng
Qin Zhang
Yingxia Xiang
Jie Cao
Wei Shen
Second Affiliated Hospital of Chongqing Medical University · CNDalian Medical University · CNChengdu Third People's Hospital · CNChongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The liver X receptor alpha (LXRα), a member of the nuclear receptor superfamily, has been shown to regulate the expression of the fatty acid synthase (FAS) gene through direct interaction with the FAS promoter. However, its regulation of gene expression is not completely understood. Histone modifications and chromatin remodeling are closely linked to transcriptional activation of genes. In the present study, we examined the effect of LXRα activation or silencing on histone modifications (i.e., acetylation, methylation, and phosphorylation) across the FAS gene, with the aim to investigate whether LXRα could regulate its target gene expression at the epigenetic level. The addition of LXR agonist T0901317 or ectopic expression of LXRα stimulated the FAS transcription, which was coupled with increased levels of histones H3 and H4 acetylation and H3 phosphorylation and methylation at the LXR response element (LXRE). LXR ligation or overexpression induced distinct histone modification patterns at the distal region 2,272 bp upstream from the transcription start site (TSS) and TSS of the FAS gene. Moreover, RNA interference-mediated downregulation of LXRα impaired the histone acetylation and methylation but not phosphorylation on the FAS gene. In conclusion, we provide evidence that LXRα ligation-mediated transcriptional activation of the FAS gene is associated with LXRα-dependent histone acetylation and methylation rather than phosphorylation on this target gene.

Indexed as

HistonesAcetylationBenzenesulfonamidesCell Line, TumorDown-RegulationFatty Acid SynthasesFluorocarbonsHumansHydrocarbons, FluorinatedLiver X ReceptorsMethylationOrphan Nuclear ReceptorsRNA InterferenceSulfonamidesBenzenesulfonamidesFatty Acid SynthasesFluorocarbonsHistonesHydrocarbons, FluorinatedLiver X ReceptorsNR1H3 protein, humanOrphan Nuclear ReceptorsSulfonamidesT0901317

Identifiers

PMID22160584
OpenAlexW2006221041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.