Evidence map›Paper›PMID 22158537›Full record

SynthesisNature genetics2011

Meta-analysis of genome-wide association studies identifies eight new loci for type 2 diabetes in east Asians.

Yoon Shin Cho, Chien-Hsiun Chen, Cheng Hu, Jirong Long, Rick Twee Hee Ong, Xueling Sim, Fumihiko Takeuchi, Ying Wu, Min Jin Go, Toshimasa Yamauchi and 58 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 360 papers, 15 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
360citing papers in PubMed, 15 pooled it
53.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

360 citing papers in PubMed, 15 syntheses or guidelines pooled it, 614 citations in OpenAlex.

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300 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

68 authors at 20 institutions in 8 countries.

Yoon Shin ChoCenter for Genome Science, National Institute of Health, Osong Health Technology Administration Complex, Chungcheongbuk-do, Cheongwon-gun, Gangoe-myeon, Yeonje-ri, Korea. yooncho33@korea.kr
Chien-Hsiun Chen
Cheng Hu
Jirong Long
Rick Twee Hee Ong
Xueling Sim
Fumihiko Takeuchi
Ying Wu
Min Jin Go
Toshimasa Yamauchi
Yi-Cheng Chang
Soo Heon Kwak
Ronald C W Ma
Ken Yamamoto
Linda S Adair
Tin Aung
Qiuyin Cai
Li-Ching Chang
Yuan-Tsong Chen
Yutang Gao
Frank B Hu
Hyung-Lae Kim
Sangsoo Kim
Young Jin Kim
Jeannette Jen-Mai Lee
Nanette R Lee
Yun Li
Jian Jun Liu
Wei Lu
Jiro Nakamura
Eitaro Nakashima
Daniel Peng-Keat Ng
Wan Ting Tay
Fuu-Jen Tsai
Tien Yin Wong
Mitsuhiro Yokota
Wei Zheng
Rong Zhang
Congrong Wang
Wing Yee So
Keizo Ohnaka
Hiroshi Ikegami
Kazuo Hara
Young Min Cho
Nam H Cho
Tien-Jyun Chang
Yuqian Bao
Åsa K Hedman
Andrew P Morris
Mark I McCarthy
DIAGRAM Consortium
MuTHER Consortium
Ryoichi Takayanagi
Kyong Soo Park
Weiping Jia
Lee-Ming Chuang
Juliana C N Chan
Shiro Maeda
Takashi Kadowaki
Jong-Young Lee
Jer-Yuarn Wu
Yik Ying Teo
E Shyong Tai
Xiao Ou Shu
Karen L Mohlke
Norihiro Kato
Bok-Ghee Han
Mark Seielstad
Korea National Institute of Health · KRNational University of Singapore · SGUniversity of North Carolina at Chapel Hill · USVanderbilt University · USInstitute of Biomedical Sciences, Academia Sinica · TWKyushu University · JPPrince of Wales Hospital · CNShanghai Sixth People's Hospital · CNThe University of Tokyo · JPAgency for Science, Technology and Research · SGCentre for Human Genetics · GBChina Medical University · TWNagoya University · JPNational Center for Global Health and Medicine · JPNational Taiwan University · TWNational Taiwan University Hospital · TWSeoul National University · KRShanghai Jiao Tong University · CNSingapore National Eye Center · SGAichi Gakuin University · JP

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
UNIV OF NORTH CAROLINA CLINICAL NUTRITION RESEARCH UNITP30DK056350 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Ian Michael Carroll · 1999 to 2026
$31.6M
BIOCHEMICAL AND GENETIC MARKERS OF TYPE 2 DIABETES RISKR01DK058845 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI HU, FRANK B · 2001 to 2013
$7.8M
Shanghai Breast Cancer StudyR01CA064277 · NCI · VANDERBILT UNIVERSITY · PI SHU, XIAO-OU · 1996 to 2012
$4.8M
CANCER RISK REDUCTION AND DIET--A COHORT STUDY OF WOMENR01CA070867 · NCI · VANDERBILT UNIVERSITY · PI ZHENG, WEI · 1996 to 2007
$4.6M
The Nashville Breast Health StudyR01CA100374 · NCI · VANDERBILT UNIVERSITY · PI ZHENG, WEI · 2004 to 2009
$4.2M
MOLECULAR EPIDEMIOLOGIC STUDY OF BREAST CANCERR01CA090899 · NCI · VANDERBILT UNIVERSITY · PI ZHENG, WEI · 2000 to 2009
$3.5M
Consortium Study to Identify Breast Cancer Susceptibility LociR01CA148667 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI LONG, JIRONG, ZHENG, WEI · 2011 to 2015
$3.3M
Genetic Factors for Breast Cancer- A genome Wide StudyR01CA124558 · NCI · VANDERBILT UNIVERSITY · PI ZHENG, WEI · 2008 to 2012
$3.1M
Breast Cancer Survival: Lifestyle and Genetic DeterminantsR01CA118229 · NCI · VANDERBILT UNIVERSITY · PI SHU, XIAO-OU · 2007 to 2010
$2.9M
Genetic Epidemiology of Body Mass Index, Adiposity and Weight GainR01DK078150 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MOHLKE, KAREN L. · 2007 to 2010
$2.3M
FIC NIH HHS R01 TW005596FIC NIH HHS R01 TW008288FIC NIH HHS TW008288FIC NIH HHS TW05596Medical Research Council G0600717Medical Research Council G0900339Medical Research Council MC_U106179471NCI NIH HHS R01 CA064277NCI NIH HHS R01 CA070867NCI NIH HHS R01 CA090899NCI NIH HHS R01 CA092585NCI NIH HHS R01 CA100374NCI NIH HHS R01CA100374NCI NIH HHS R01 CA118229NCI NIH HHS R01CA118229NCI NIH HHS R01 CA124558NCI NIH HHS R01CA124558NCI NIH HHS R01 CA148667NCI NIH HHS R01CA64277NCI NIH HHS R01CA70867NCI NIH HHS R01CA90899NCI NIH HHS R01CA92585NCRR NIH HHS P20 RR020649NCRR NIH HHS RR20649NCRR NIH HHS UL1 RR024975NCRR NIH HHS UL1RR024975NHGRI NIH HHS HG004399NHGRI NIH HHS U01 HG004399NHLBI NIH HHS HL085144NHLBI NIH HHS R01 HL085144NIDDK NIH HHS DK078150NIDDK NIH HHS DK56350NIDDK NIH HHS DK58845NIDDK NIH HHS P30 DK056350NIDDK NIH HHS R01 DK058845NIDDK NIH HHS R01 DK078150NIEHS NIH HHS ES10126NIEHS NIH HHS P30 ES010126Wellcome Trust 090532Wellcome Trust 095515
6 · The paper itself

Abstract

We conducted a three-stage genetic study to identify susceptibility loci for type 2 diabetes (T2D) in east Asian populations. We followed our stage 1 meta-analysis of eight T2D genome-wide association studies (6,952 cases with T2D and 11,865 controls) with a stage 2 in silico replication analysis (5,843 cases and 4,574 controls) and a stage 3 de novo replication analysis (12,284 cases and 13,172 controls). The combined analysis identified eight new T2D loci reaching genome-wide significance, which mapped in or near GLIS3, PEPD, FITM2-R3HDML-HNF4A, KCNK16, MAEA, GCC1-PAX4, PSMD6 and ZFAND3. GLIS3, which is involved in pancreatic beta cell development and insulin gene expression, is known for its association with fasting glucose levels. The evidence of an association with T2D for PEPD and HNF4A has been shown in previous studies. KCNK16 may regulate glucose-dependent insulin secretion in the pancreas. These findings, derived from an east Asian population, provide new perspectives on the etiology of T2D.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAdultAsia, EasternAsian PeopleBlood GlucoseCase-Control StudiesChromosome MappingDiabetes Mellitus, Type 2HumansPolymorphism, Single NucleotideBlood Glucose

Identifiers

PMID22158537
PMCPMC3582398
OpenAlexW2169189827

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.