Evidence map›Paper›PMID 22158071›Full record

ArticlePancreas2012

Inhibition of glycogen phosphorylation induces changes in cellular proteome and signaling pathways in MIA pancreatic cancer cells.

Danjun Ma, Jiarui Wang, Yingchun Zhao, Wai-Nang Paul Lee, Jing Xiao, Vay Liang W Go, Qi Wang, Robert R Recker, Gary Guishan Xiao

Abstract read
In one paragraph

Article in Pancreas, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. New thoughts and findings on invasion and metastasis of pancreatic ductal adenocarcinoma (PDAC) from comparative proteomics: multi-target therapy.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. A critical review of the role of MBiochimica et biophysica acta. Reviews on cancer · 2019
    Review
  10. The Warburg effect: a balance of flux analysis.Metabolomics : Official journal of the Metabolomic Society · 2015
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Danjun MaGenomics & Functional Proteomics Laboratories, Osteoporosis Research Center, Creighton University Medical Center, Omaha, NE 68131, USA.
Jiarui Wang
Yingchun Zhao
Wai-Nang Paul Lee
Jing Xiao
Vay Liang W Go
Qi Wang
Robert R Recker
Gary Guishan Xiao
Creighton University · USCHI Health Creighton University Medical Center - Bergan Mercy · USDalian Medical University · CNHarbor–UCLA Medical Center · USSecond Affiliated Hospital of Dalian Medical University · CNUniversity of California, Los Angeles · US

Funding

ZONA-FREE HAMSTER OVA ASSAY AS AN INDICATOR OF MALE FERTILITYM01RR000425 · NCRR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI ANDERSON, GAIL V · 1985 to 2011
$74.2M
UCLA Center for Excellence in Pancreatic DiseasesP01AT003960 · NCCIH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GO, VAY LIANG W · 2007 to 2011
$5.6M
NCCIH NIH HHS P01 AT003960NCCIH NIH HHS P01 AT003960-01NCRR NIH HHS M01 RR000425NCRR NIH HHS M01 RR00425
6 · The paper itself

Abstract

objectivesNovel quantitative proteomic approaches were used to study the effects of inhibition of glycogen phosphorylase on proteome and signaling pathways in MIA PaCa-2 pancreatic cancer cells.

methodsWe performed quantitative proteomic analysis in MIA PaCa-2 cancer cells treated with a stratified dose of CP-320626 (5-chloro-1H-indole-2-carboxylic acid [1-(4-fuorobenzyl)-2-(4-hydroxypiperidin-1-yl)-2 oxoethyl] amide) (25, 50, and 100 μM). The effect of metabolic inhibition on cellular protein turnover dynamics was also studied using the modified SILAC (stable isotope labeling with amino acids in cell culture) method.

resultsA total of 22 protein spots and 4 phosphoprotein spots were quantitatively analyzed. We found that dynamic expression of total proteins and phosphoproteins was significantly changed in MIA PaCa-2 cells treated with an incremental dose of CP-320626. Functional analyses suggested that most of the proteins differentially expressed were in the pathways of mitogen-activated protein kinase/extracellular signal-regulated kinase and tumor necrosis factor α/nuclear factor κB.

conclusionsSignaling pathways and metabolic pathways share many common cofactors and substrates forming an extended metabolic network. The restriction of substrate through 1 pathway such as inhibition of glycogen phosphorylation induces pervasive metabolomic and proteomic changes manifested in protein synthesis, breakdown, and posttranslational modification of signaling molecules. Our results suggest that quantitative proteomic is an important approach to understand the interaction between metabolism and signaling pathways.

Indexed as

AmidesApoptosisCell Cycle CheckpointsCell Line, TumorDose-Response Relationship, DrugElectrophoresis, Gel, Two-DimensionalEnzyme InhibitorsGlycogenGlycogen PhosphorylaseHumansIndolesNeoplasm ProteinsPancreatic NeoplasmsPeptide MappingPhosphorylationProteomicsAmidesCP 320626Enzyme InhibitorsGlycogenGlycogen PhosphorylaseIndolesNeoplasm Proteins

Identifiers

PMID22158071
PMCPMC3306546
OpenAlexW2074134911

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.