Evidence map›Paper›PMID 22157931›Full record

ArticleModern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc2012

EGFR and KRAS mutation analysis in cytologic samples of lung adenocarcinoma enabled by laser capture microdissection.

Sinchita Roy Chowdhuri, Liqiang Xi, Trinh Hoc-Tran Pham, Jeffrey Hanson, Jaime Rodriguez-Canales, Arlene Berman, Arun Rajan, Giuseppe Giaccone, Michael Emmert-Buck, Mark Raffeld and 1 more

Open access · bronzeAbstract readComparative StudyValidation Study
In one paragraph

Article in Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Effect of Antigen Retrieval on Genomic DNA From Immunodissected Samples.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2022
    Article
  3. Review
  4. Article
  5. Article
  6. Journal of global oncology · 2016
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
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  14. Article
  15. Review
  16. Ocular metastasis of lung adenocarcinoma with ELM4-ALK translocation: A case report with a review of the literature.Saudi journal of ophthalmology : official journal of the Saudi Ophthalmological Society · 2013
    Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Sinchita Roy ChowdhuriLaboratory of Pathology, National Cancer Institute, Bethesda, MD 20892, USA.
Liqiang Xi
Trinh Hoc-Tran Pham
Jeffrey Hanson
Jaime Rodriguez-Canales
Arlene Berman
Arun Rajan
Giuseppe Giaccone
Michael Emmert-Buck
Mark Raffeld
Armando C Filie
National Cancer Institute · USNational Institutes of Health · US

Funding

Molecular Diagnostics Core LaboratoryZICBC011079 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI XI, LIQIANG · 2009 to 2025
$33.8M
Cytopathology CoreZICBC011052 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FILIE, ARMANDO · 2009 to 2025
$30.8M
Molecular Pathology of CancerZIASC010437 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI EMMERT-BUCK, MICHAEL · 2009 to 2014
$2.9M
Technology DevelopmentZIABC010729 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI EMMERT-BUCK, MICHAEL · 2009 to 2014
$2.5M
Cytopathology CoreZ01BC011052 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FILIE, ARMANDO · 2008 to 2008
$1.5M
Intramural NIH HHS Z01 BC011052
6 · The paper itself

Abstract

The discovery of activating mutations in EGFR and KRAS in a subset of lung adenocarcinomas was a major advance in our understanding of lung adenocarcinoma biology, and has led to groundbreaking studies that have demonstrated the efficacy of tyrosine kinase inhibitor therapy. Fine-needle aspirates and other cytologic procedures have become increasingly popular for obtaining diagnostic material in lung carcinomas. However, frequently the small amount of material or sparseness of tumor cells obtained from cytologic preparations limit the number of specialized studies, such as mutation analysis, that can be performed. In this study we used laser capture microdissection to isolate small numbers of tumor cells to assess for EGFR and KRAS mutations from cell block sections of 19 cytology samples from patients with known lung adenocarcinomas. We compared our results with previous molecular assays that had been performed on either surgical or cytology specimens as part of the patient's initial clinical work-up. Not only were we able to detect the identical EGFR or KRAS mutation that was present in the patient's prior molecular assay in every case, but we were also able to consistently detect the mutation from as few as 50 microdissected tumor cells. Furthermore, isolating a more pure population of tumor cells resulted in increased sensitivity of mutation detection as we were able to detect mutations from laser capture microdissection-enriched cases where the tumor load was low and traditional methods of whole slide scraping failed. Therefore, this method can not only significantly increase the number of lung adenocarcinoma patients that can be screened for EGFR and KRAS mutations, but can also facilitate the use of cytologic samples in the newly emerging field of molecular-based personalized therapies.

Indexed as

DNA Mutational AnalysisLaser Capture MicrodissectionMutationAdenocarcinomaAdenocarcinoma of LungAdultAgedBiopsy, Fine-NeedleErbB ReceptorsFeasibility StudiesFemaleHumansLung NeoplasmsMaleMarylandMiddle AgedEGFR protein, humanErbB ReceptorsKRAS protein, humanProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)ras Proteins

Identifiers

PMID22157931
PMCPMC7470622
OpenAlexW2023338738

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.