Evidence map›Paper›PMID 22157018›Full record

ArticleThe Journal of biological chemistry2012

Amino acids regulate expression of antizyme-1 to modulate ornithine decarboxylase activity.

Ramesh M Ray, Mary Jane Viar, Leonard R Johnson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ramesh M RayDepartment of Physiology, University of Tennessee Health Science Center, Memphis, Tennessee 38163, USA. rray3@uthsc.edu
Mary Jane Viar
Leonard R Johnson
University of Tennessee Health Science Center · US

Funding

GI HORMONES AND OTHER FACTORS ON GROWTH OF GI MUCOSAR37DK016505 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI TIGYI, GABOR J · 1988 to 2014
$4.8M
POLYAMINES AND EARLY GI MUCOSAL RESTITUTIONR01DK052784 · NIDDK · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI JOHNSON, LEONARD R. · 1997 to 2011
$3.5M
GI HORMONES AND OTHER FACTORS ON GROWTH OF GI MUCOSAR01DK016505 · NIDDK · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI JOHNSON, LEONARD R. · 1986 to 2004
$2.0M
NIDDK NIH HHS DK-052784NIDDK NIH HHS DK052784-13S1NIDDK NIH HHS DK-16505NIDDK NIH HHS R01 DK016505NIDDK NIH HHS R01 DK052784NIDDK NIH HHS R37 DK016505
6 · The paper itself

Abstract

In a glucose-salt solution (Earle's balanced salt solution), asparagine (Asn) stimulates ornithine decarboxylase (ODC) activity in a dose-dependent manner, and the addition of epidermal growth factor (EGF) potentiates the effect of Asn. However, EGF alone fails to activate ODC. Thus, the mechanism by which Asn activates ODC is important for understanding the regulation of ODC activity. Asn reduced antizyme-1 (AZ1) mRNA and protein. Among the amino acids tested, Asn and glutamine (Gln) effectively inhibited AZ1 expression, suggesting a differential role for amino acids in the regulation of ODC activity. Asn decreased the putrescine-induced AZ1 translation. The absence of amino acids increased the binding of eukaryotic initiation factor 4E-binding protein (4EBP1) to 5'-mRNA cap and thereby inhibited global protein synthesis. Asn failed to prevent the binding of 4EBP1 to mRNA, and the bound 4EBP1 was unphosphorylated, suggesting the involvement of the mammalian target of rapamycin (mTOR) in the regulation of AZ1 synthesis. Rapamycin treatment (4 h) failed to alter the expression of AZ1. However, extending the treatment (24 h) allowed expression in the presence of amino acids, indicating that AZ1 is expressed when TORC1 signaling is decreased. This suggests the involvement of cap-independent translation. However, transient inhibition of mTORC2 by PP242 completely abolished the phosphorylation of 4EBP1 and decreased basal as well as putrescine-induced AZ1 expression. Asn decreased the phosphorylation of mTOR-Ser(2448) and AKT-Ser(473), suggesting the inhibition of mTORC2. In the absence of amino acids, mTORC1 is inhibited, whereas mTORC2 is activated, leading to the inhibition of global protein synthesis and increased AZ1 synthesis via a cap-independent mechanism.

Indexed as

Adaptor Proteins, Signal TransducingAsparagineCell Cycle ProteinsCell LineGene Expression RegulationOrnithine DecarboxylasePhosphoproteinsProtein BiosynthesisProteinsRNA CapsTOR Serine-Threonine KinasesTranscription FactorsAdaptor Proteins, Signal TransducingAsparagineCell Cycle ProteinsCRTC1 protein, humanCRTC2 protein, humanEIF4EBP1 protein, humanMTOR protein, humanOrnithine Decarboxylaseornithine decarboxylase antizymePhosphoproteinsProteinsRNA CapsTOR Serine-Threonine KinasesTranscription Factors

Identifiers

PMID22157018
PMCPMC3281678
OpenAlexW2036860619

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.