Evidence map›Paper›PMID 22152679›Full record

ArticleAmerican journal of human genetics2011

Homozygosity mapping and candidate prioritization identify mutations, missed by whole-exome sequencing, in SMOC2, causing major dental developmental defects.

Agnès Bloch-Zupan, Xavier Jamet, Christelle Etard, Virginie Laugel, Jean Muller, Véronique Geoffroy, Jean-Pierre Strauss, Valérie Pelletier, Vincent Marion, Olivier Poch and 3 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of human genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 104 citations in OpenAlex.

  1. [Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Gene Misexpression in aJournal of the Endocrine Society · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Analysis ofInternational journal of ophthalmology · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Genetic/Protein Association of Atopic Dermatitis and Tooth Agenesis.International journal of molecular sciences · 2023
    Review
  15. bioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Article
  18. Targeted next-generation sequencing (NGS) analysis of mutations in nonsyndromic tooth agenesis candidate genes : Analysis of a Turkish cohort.Journal of orofacial orthopedics = Fortschritte der Kieferorthopadie : Organ/official journal Deutsche Gesellschaft fur Kieferorthopadie · 2022
    Article
  19. NovelJournal of personalized medicine · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Agnès Bloch-ZupanFaculty of Dentistry, University of Strasbourg, 1 place de l'Hôpital, Strasbourg, France.
Xavier Jamet
Christelle Etard
Virginie Laugel
Jean Muller
Véronique Geoffroy
Jean-Pierre Strauss
Valérie Pelletier
Vincent Marion
Olivier Poch
Uwe Strahle
Corinne Stoetzel
Hélène Dollfus
Inserm · FRUniversité de Strasbourg · FRCentre National de la Recherche Scientifique · FRKarlsruhe Institute of Technology · DEHôpitaux Universitaires de Strasbourg · FRInstitut de génétique et de biologie moléculaire et cellulaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inherited dental malformations constitute a clinically and genetically heterogeneous group of disorders. Here, we report on a severe developmental dental defect that results in a dentin dysplasia phenotype with major microdontia, oligodontia, and shape abnormalities in a highly consanguineous family. Homozygosity mapping revealed a unique zone on 6q27-ter. The two affected children were found to carry a homozygous mutation in SMOC2. Knockdown of smoc2 in zebrafish showed pharyngeal teeth that had abnormalities reminiscent of the human phenotype. Moreover, smoc2 depletion in zebrafish affected the expression of three major odontogenesis genes: dlx2, bmp2, and pitx2.

Indexed as

Chromosome MappingExomeHomozygoteSequence Analysis, DNAAdaptor Proteins, Signal TransducingAnimalsCalcium-Binding ProteinsCarrier ProteinsChildChild, PreschoolChromosomes, Human, Pair 6ConsanguinityDentin DysplasiaFemaleGene ExpressionGene Expression Regulation, DevelopmentalAdaptor Proteins, Signal TransducingCalcium-Binding ProteinsCarrier ProteinsDACT2 protein, humanNeoplasm ProteinsSMOC2 protein, human

Identifiers

PMID22152679
PMCPMC3234372
OpenAlexW2023232011

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.