Evidence map›Paper›PMID 22151687›Full record

ArticleBMC infectious diseases2011

Molecular detection and speciation of pathogenic Leptospira spp. in blood from patients with culture-negative leptospirosis.

Siriphan Boonsilp, Janjira Thaipadungpanit, Premjit Amornchai, Vanaporn Wuthiekanun, Wirongrong Chierakul, Direk Limmathurotsakul, Nicholas P Day, Sharon J Peacock

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Article in BMC infectious diseases, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Retrospective Molecular Detection and Characterization of PathogenicTropical medicine and infectious disease · 2026
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  10. Application of Multilocus Sequence Typing for the Characterization ofTropical medicine and infectious disease · 2023
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  11. Observational
  12. Potentially PathogenicTropical medicine and infectious disease · 2020
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  14. Low Prevalence ofTropical medicine and infectious disease · 2020
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  15. Seroprevalence ofJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2020
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  16. Article
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  18. Leptospiral Culture without 5'-Fluorouracil Revealed ImprovedInternational journal of environmental research and public health · 2020
    Article
  19. Observational
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

Siriphan BoonsilpMahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.
Janjira Thaipadungpanit
Premjit Amornchai
Vanaporn Wuthiekanun
Wirongrong Chierakul
Direk Limmathurotsakul
Nicholas P Day
Sharon J Peacock

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundPathogenic Leptospira spp. present in the blood of patients with leptospirosis during the first week of symptoms can be detected using culture or PCR. A proportion of patients who are positive by PCR are negative by culture. Leptospira spp. are fastidious bacteria, and we hypothesized that a false-negative culture result may represent infection with a distinct bacterial subset that fail to grow in standard culture medium.

methodsWe evaluated our hypothesis during a prospective study of 418 consecutive patients presenting to a hospital in northeast Thailand with an acute febrile illness. Admission blood samples were taken for Leptospira culture and PCR. A single tube nested PCR that amplified a region of the rrs gene was developed and applied, amplicons sequenced and a phylogenetic tree reconstructed.

results39/418 (9%) patients were culture-positive for Leptospira spp., and 81/418 (19%) patients were culture-negative but rrs PCR-positive. The species associated with culture-positive leptospirosis (37 L. interrogans and 2 L. borgpetersenii) were comparable to those associated with culture-negative, PCR-positive leptospirosis (76 L. interrogans, 4 L. borgpetersenii, 1 unidentified, possibly new species).

conclusionMolecular speciation failed to identify a unique bacterial subset in patients with culture-negative, PCR-positive leptospirosis. The rate of false-negative culture was high, and we speculate that antibiotic pre-treatment is the most likely explanation for this.

Indexed as

Bacterial Typing TechniquesDNA, BacterialFalse Negative ReactionsHumansLeptospiraLeptospirosisPhylogenyPolymerase Chain ReactionProspective StudiesSensitivity and SpecificitySequence Analysis, DNAThailandDNA, Bacterial

Identifiers

PMID22151687
PMCPMC3297668

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.