Evidence map›Paper›PMID 22149624›Full record

ArticleLangmuir : the ACS journal of surfaces and colloids2012

An integrated stochastic model of "inside-out" integrin activation and selective T-lymphocyte recruitment.

Michael T Beste, Dooyoung Lee, Michael R King, Gary A Koretzky, Daniel A Hammer

Abstract read
In one paragraph

Article in Langmuir : the ACS journal of surfaces and colloids, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Adhesive dynamics simulations quantitatively predict effects of kindlin-3 deficiency on T-cell homing.Integrative biology : quantitative biosciences from nano to macro · 2019
    Article
  3. Article
  4. Article
  5. Article
  6. Adhesive dynamics.Journal of biomechanical engineering · 2014
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Michael T BesteDepartment of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Dooyoung Lee
Michael R King
Gary A Koretzky
Daniel A Hammer
Cornell University · USUniversity of Pennsylvania · US

Funding

Simulation of Lymphocyte Adhesion using Integrated Adhesive DynamicsR01AI082292 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAMMER, DANIEL A · 2009 to 2017
$2.8M
Blood Systems BiologyR33HL087353 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI HAMMER, DANIEL A · 2006 to 2008
$820k
NHLBI NIH HHS R33 HL087353NIAID NIH HHS AI082292NIAID NIH HHS R01 AI082292
6 · The paper itself

Abstract

The pattern of T-lymphocyte homing is hypothesized to be controlled by combinations of chemokine receptors and complementary chemokines. Here, we use numerical simulation to explore the relationship among chemokine potency and concentration, signal transduction, and adhesion. We have developed a form of adhesive dynamics-a mechanically accurate stochastic simulation of adhesion-that incorporates stochastic signal transduction using the next subvolume method. We show that using measurable parameter estimates derived from a variety of sources, including signaling measurements that allow us to test parameter values, we can readily simulate approximate time scales for T-lymphocyte arrest. We find that adhesion correlates with total chemokine receptor occupancy, not the frequency of occupation, when multiple chemokine receptors feed through a single G-protein. A general strategy for selective T-lymphocyte recruitment appears to require low affinity chemokine receptors. For a single chemokine receptor, increases in multiple cross-reactive chemokines can lead to an overwhelming increase in adhesion. Overall, the methods presented here provide a predictive framework for understanding chemokine control of T-lymphocyte recruitment.

Indexed as

Models, BiologicalCell AdhesionCell MovementChemokinesIntegrinsReceptors, Lymphocyte HomingSignal TransductionStochastic ProcessesT-LymphocytesChemokinesIntegrinsReceptors, Lymphocyte Homing

Identifiers

PMID22149624
PMCPMC3269544
OpenAlexW2079817030

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.