Evidence map›Paper›PMID 22147560›Full record

ArticleCell stress & chaperones2012

OsHsfA2c and OsHsfB4b are involved in the transcriptional regulation of cytoplasmic OsClpB (Hsp100) gene in rice (Oryza sativa L.).

Amanjot Singh, Dheeraj Mittal, Dhruv Lavania, Manu Agarwal, Ratnesh Chandra Mishra, Anil Grover

Abstract read
In one paragraph

Article in Cell stress & chaperones, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 79 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Integrating physiological and multi-omics methods to elucidate heat stress tolerance for sustainable rice production.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  5. Article
  6. Plant Adaptation and Tolerance to Heat Stress: Advance Approaches and Future Aspects.Combinatorial chemistry & high throughput screening · 2024
    Review
  7. Review
  8. StHsfB5 Promotes Heat Resistance by Directly Regulating the Expression ofInternational journal of molecular sciences · 2023
    Article
  9. Review
  10. Heat Shock Transcription Factor GhHSFB2a Is Crucial for Cotton Resistance toInternational journal of molecular sciences · 2023
    Article
  11. Review
  12. International journal of molecular sciences · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Genome-Wide Identification, Classification, and Expression Analysis of theInternational journal of molecular sciences · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Amanjot SinghDepartment of Plant Molecular Biology, University of Delhi South Campus, New Delhi 110021, India.
Dheeraj Mittal
Dhruv Lavania
Manu Agarwal
Ratnesh Chandra Mishra
Anil Grover
University of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ClpB-cytoplasmic (ClpB-cyt)/Hsp100 is an important chaperone protein in rice. Cellular expression of OsClpB-cyt transcript is governed by heat stress, metal stress, and developmental cues. Transgenic rice plants produced with 2 kb OsClpB-cyt promoter driving Gus reporter gene showed heat- and metal-regulated Gus expression in vegetative tissues and constitutive Gus expression in calli, flowering tissues, and embryonal half of seeds. Rice seedlings regenerated with OsClpB-cyt promoter fragment with deletion of its canonical heat shock element sequence (HSE(-273 to -280)) showed not only heat shock inducibility of Gus transcript/protein but also constitutive expression of Gus in vegetative tissues. It thus emerges that the only classical HSE present in OsClpB-cyt promoter is involved in repressing expression of OsClpB-cyt transcript under unstressed control conditions. Yeast one-hybrid assays suggested that OsHsfA2c specifically interacts with OsClpB-cyt promoter. OsHsfA2c also showed binding with OsClpB-cyt and OsHsfB4b showed binding with OsClpB-cyt; notably, interaction of OsHsfB4b was seen for all three OsClpB/Hsp100 protein isoforms (i.e., ClpB-cytoplasmic, ClpB-mitochondrial, and ClpB-chloroplastic). Furthermore, OsHsfB4b showed interaction with OsHsfA2c. This study suggests that OsHsfA2c may play a role as transcriptional activator and that OsHsfB4b is an important part of this heat shock responsive circuitry.

Indexed as

Gene Expression Regulation, PlantGenes, PlantDNA-Binding ProteinsHeat-Shock ProteinsHeat Shock Transcription FactorsMutationOryzaPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticProtein BindingTranscription FactorsDNA-Binding ProteinsHeat-Shock ProteinsHeat Shock Transcription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID22147560
PMCPMC3273560
OpenAlexW2085787225

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.