Evidence map›Paper›PMID 22147262›Full record

ArticleCancer research2012

Identification of molecular vulnerabilities in human multiple myeloma cells by RNA interference lethality screening of the druggable genome.

Rodger E Tiedemann, Yuan Xao Zhu, Jessica Schmidt, Chang Xin Shi, Chris Sereduk, Hongwei Yin, Spyro Mousses, A Keith Stewart

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 129 citations in OpenAlex.

  1. Selective Inhibition of Nuclear Export With Oral Selinexor for Treatment of Relapsed or Refractory Multiple Myeloma.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2018
    Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Treatment of multiple myeloma with selinexor: a review.Therapeutic advances in hematology · 2024
    Review
  12. Article
  13. Article
  14. Therapeutic gene silencing ofScience advances · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. RNA-binding proteins of COSMIC importance in cancer.The Journal of clinical investigation · 2021
    Review
  19. Article
  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Rodger E TiedemannPrincess Margaret Hospital, Ontario Cancer Institute and the University of Toronto, Toronto, Ontario, Canada. rodger.tiedemann@uhnresearch.ca
Yuan Xao Zhu
Jessica Schmidt
Chang Xin Shi
Chris Sereduk
Hongwei Yin
Spyro Mousses
A Keith Stewart
Translational Genomics Research Institute · USMayo Clinic in Arizona · USPrincess Margaret Cancer Centre · CA

Funding

Trageting the Multiple Myeloma EpigenomeP50CA100707 · NCI · DANA-FARBER CANCER INSTITUTE · PI MUNSHI, NIKHIL C. · 2003 to 2023
$45.0M
The Molecular Basis for Bortezomib ActivityR01CA129009 · NCI · MAYO CLINIC ARIZONA · PI STEWART, ALEXANDER KEITH · 2007 to 2011
$1.5M
A Genome Wide RNAi Vulnerability Map for MyelomaR01CA133115 · NCI · MAYO CLINIC ARIZONA · PI STEWART, ALEXANDER KEITH · 2008 to 2012
$1.3M
NCI NIH HHS P50 CA100707NCI NIH HHS R01 CA129009NCI NIH HHS R01CA129009-03NCI NIH HHS R01 CA133115NCI NIH HHS R01CA133115-02PHS HHS 5P5OCA100707-08
6 · The paper itself

Abstract

Despite recent advances in targeted treatments for multiple myeloma, optimal molecular therapeutic targets have yet to be identified. To functionally identify critical molecular targets, we conducted a genome-scale lethality study in multiple myeloma cells using siRNAs. We validated the top 160 lethal hits with four siRNAs per gene in three multiple myeloma cell lines and two non-myeloma cell lines, cataloging a total of 57 potent multiple myeloma survival genes. We identified the Bcl2 family member MCL1 and several 26S proteasome subunits among the most important and selective multiple myeloma survival genes. These results provided biologic validation of our screening strategy. Other essential targets included genes involved in RNA splicing, ubiquitination, transcription, translation, and mitosis. Several of the multiple myeloma survival genes, especially MCL1, TNK2, CDK11, and WBSCR22, exhibited differential expression in primary plasma cells compared with other human primary somatic tissues. Overall, the most striking differential functional vulnerabilities between multiple myeloma and non-multiple myeloma cells were found to occur within the 20S proteasome subunits, MCL1, RRM1, USP8, and CKAP5. We propose that these genes should be investigated further as potential therapeutic targets in multiple myeloma.

Indexed as

RNA InterferenceAntineoplastic AgentsBiomarkers, TumorCell Line, TumorCell SurvivalCyclin-Dependent KinasesGene Expression ProfilingGene Expression Regulation, NeoplasticGenes, LethalGenetic Predisposition to DiseaseGenome, HumanHEK293 CellsHumansMethyltransferasesMultiple MyelomaMyeloid Cell Leukemia Sequence 1 ProteinAntineoplastic AgentsBiomarkers, TumorBUD23 protein, humanCDK11a protein, humanCyclin-Dependent KinasesMethyltransferasesMyeloid Cell Leukemia Sequence 1 ProteinProtein-Tyrosine KinasesProto-Oncogene Proteins c-bcl-2TNK2 protein, human

Identifiers

PMID22147262
PMCPMC3622723
OpenAlexW2035296409

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.