Evidence map›Paper›PMID 22146300›Full record

ArticleMolecular systems biology2011

Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico.

Hisao Moriya, Ayako Chino, Orsolya Kapuy, Attila Csikász-Nagy, Béla Novák

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Network topology creates independent control of multiple checkpoints in the cell cycle system.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  5. Review
  6. Article
  7. Quantitative nature of overexpression experiments.Molecular biology of the cell · 2015
    Article
  8. Article
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  10. Article
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  12. Article
  13. Dynamics of SIN asymmetry establishment.PLoS computational biology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Hisao MoriyaResearch Core for Interdisciplinary Sciences, Okayama University, Okayama, Japan.
Ayako Chino
Orsolya Kapuy
Attila Csikász-Nagy
Béla Novák
Okayama University · JPScience Oxford · GBThe Microsoft Research - University of Trento Centre for Computational and Systems Biology · ITUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellular systems are generally robust against fluctuations of intracellular parameters such as gene expression level. However, little is known about expression limits of genes required to halt cellular systems. In this study, using the fission yeast Schizosaccharomyces pombe, we developed a genetic 'tug-of-war' (gTOW) method to assess the overexpression limit of certain genes. Using gTOW, we determined copy number limits for 31 cell-cycle regulators; the limits varied from 1 to >100. Comparison with orthologs of the budding yeast Saccharomyces cerevisiae suggested the presence of a conserved fragile core in the eukaryotic cell cycle. Robustness profiles of networks regulating cytokinesis in both yeasts (septation-initiation network (SIN) and mitotic exit network (MEN)) were quite different, probably reflecting differences in their physiologic functions. Fragility in the regulation of GTPase spg1 was due to dosage imbalance against GTPase-activating protein (GAP) byr4. Using the gTOW data, we modified a mathematical model and successfully reproduced the robustness of the S. pombe cell cycle with the model.

Indexed as

Gene Expression Regulation, FungalModels, GeneticCell CycleCell Cycle ProteinsComputer SimulationCytokinesisGene DosageGTP PhosphohydrolasesSchizosaccharomycesSchizosaccharomyces pombe ProteinsSystems BiologyCell Cycle ProteinsGTP PhosphohydrolasesSchizosaccharomyces pombe ProteinsSpg1 protein, S pombe

Identifiers

PMID22146300
PMCPMC3737731
OpenAlexW2099042745

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.