Evidence map›Paper›PMID 22144915›Full record

SynthesisPLoS genetics2011

Genome-wide meta-analysis of five Asian cohorts identifies PDGFRA as a susceptibility locus for corneal astigmatism.

Qiao Fan, Xin Zhou, Chiea-Chuen Khor, Ching-Yu Cheng, Liang-Kee Goh, Xueling Sim, Wan-Ting Tay, Yi-Ju Li, Rick Twee-Hee Ong, Chen Suo and 12 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in PLoS genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 5 pooled it
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 5 syntheses or guidelines pooled it, 47 citations in OpenAlex.

  1. Pooled it
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  4. Identification of a candidate gene for astigmatism.Investigative ophthalmology & visual science · 2013
    Pooled it
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  8. Review
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  14. Longitudinal change in components of astigmatism and its association with axial length-corneal radius ratio in Chinese young children: the Nanjing Eye Study.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2022
    Article
  15. Article
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  17. A Functional Synonymous Variant inJournal of Cancer · 2020
    Article
  18. Journal of ophthalmology · 2019
    Article
  19. Article
  20. Novel Myopia Genes and Pathways Identified From Syndromic Forms of Myopia.Investigative ophthalmology & visual science · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 4 countries.

Qiao FanSchool of Public Health, National University of Singapore, Singapore, Singapore.
Xin Zhou
Chiea-Chuen Khor
Ching-Yu Cheng
Liang-Kee Goh
Xueling Sim
Wan-Ting Tay
Yi-Ju Li
Rick Twee-Hee Ong
Chen Suo
Belinda Cornes
Mohammad Kamran Ikram
Kee-Seng Chia
Mark Seielstad
Jianjun Liu
Eranga Vithana
Terri L Young
E-Shyong Tai
Tien-Yin Wong
Tin Aung
Yik-Ying Teo
Seang-Mei Saw
National University of Singapore · SGAgency for Science, Technology and Research · SGSingapore National Eye Center · SGCenter for Human Genetics · USDuke University · USThe University of Melbourne · AUUniversity of California, San Francisco · US

Funding

The Molecular Genetics of High MyopiaR01EY014685 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI YOUNG, TERRI LOIS · 2003 to 2017
$8.1M
NEI NIH HHS R01 EY014685
6 · The paper itself

Abstract

Corneal astigmatism refers to refractive abnormalities and irregularities in the curvature of the cornea, and this interferes with light being accurately focused at a single point in the eye. This ametropic condition is highly prevalent, influences visual acuity, and is a highly heritable trait. There is currently a paucity of research in the genetic etiology of corneal astigmatism. Here we report the results from five genome-wide association studies of corneal astigmatism across three Asian populations, with an initial discovery set of 4,254 Chinese and Malay individuals consisting of 2,249 cases and 2,005 controls. Replication was obtained from three surveys comprising of 2,139 Indians, an additional 929 Chinese children, and an independent 397 Chinese family trios. Variants in PDGFRA on chromosome 4q12 (lead SNP: rs7677751, allelic odds ratio = 1.26 (95% CI: 1.16-1.36), P(meta) = 7.87×10(-9)) were identified to be significantly associated with corneal astigmatism, exhibiting consistent effect sizes across all five cohorts. This highlights the potential role of variants in PDGFRA in the genetic etiology of corneal astigmatism across diverse Asian populations.

Indexed as

AdultAgedAged, 80 and overAsiaAstigmatismCase-Control StudiesChildChild, PreschoolCohort StudiesCorneal DiseasesGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansInfantMaleReceptor, Platelet-Derived Growth Factor alpha

Identifiers

PMID22144915
PMCPMC3228826
OpenAlexW2155607168

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.