ArticlePLoS computational biology2011
Computational mass spectrometry-based proteomics.
Article in PLoS computational biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
29 citing papers in PubMed.
- MSConnect: Open-Source, End-to-End Platform for Automated Mass Spectrometry Data Management, Analysis, and Visualization.Journal of proteome research · 2025Article
- Attracting Computational Researchers to Proteomics.Journal of the American Society for Mass Spectrometry · 2024Article
- An MSstats workflow for detecting differentially abundant proteins in large-scale data-independent acquisition mass spectrometry experiments with FragPipe processing.Nature protocols · 2024Review
- Extracellular Vesicle Protein Expression in Doped Bioactive Glasses: Further Insights Applying Anomaly Detection.International journal of molecular sciences · 2024Article
- Triqler for Protein Summarization of Data from Data-Independent Acquisition Mass Spectrometry.Journal of proteome research · 2023Article
- Challenges and Opportunities for Single-cell Computational Proteomics.Molecular & cellular proteomics : MCP · 2023Review
- MSstatsPTM: Statistical Relative Quantification of Posttranslational Modifications in Bottom-Up Mass Spectrometry-Based Proteomics.Molecular & cellular proteomics : MCP · 2023Article
- Perspectives for better batch effect correction in mass-spectrometry-based proteomics.Computational and structural biotechnology journal · 2022Review
- CONSTANd : A Normalization Method for Isobaric Labeled Spectra by Constrained Optimization.Molecular & cellular proteomics : MCP · 2016Article
- RIPPER: a framework for MS1 only metabolomics and proteomics label-free relative quantification.Bioinformatics (Oxford, England) · 2016Article
- Techniques and Approaches to Genetic Analyses in Nephrological Disorders.Journal of pediatric genetics · 2016Review
- Warpgroup: increased precision of metabolomic data processing by consensus integration bound analysis.Bioinformatics (Oxford, England) · 2016Article
- A Pathway Proteomic Profile of Ischemic Stroke Survivors Reveals Innate Immune Dysfunction in Association with Mild Symptoms of Depression - A Pilot Study.Frontiers in neurology · 2016Article
- Detecting Significant Changes in Protein Abundance.EuPA open proteomics · 2015Article
- MS Amanda, a universal identification algorithm optimized for high accuracy tandem mass spectra.Journal of proteome research · 2014Article
- Fast and accurate database searches with MS-GF+Percolator.Journal of proteome research · 2014Article
- Statistical approach to protein quantification.Molecular & cellular proteomics : MCP · 2014Article
- A tutorial for software development in quantitative proteomics using PSI standard formats.Biochimica et biophysica acta · 2014Review
- Optimized nonlinear gradients for reversed-phase liquid chromatography in shotgun proteomics.Analytical chemistry · 2013Article
- Computational biomarker pipeline from discovery to clinical implementation: plasma proteomic biomarkers for cardiac transplantation.PLoS computational biology · 2013Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
PubMed holds no abstract for this paper.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.