Evidence map›Paper›PMID 22143165›Full record

ArticleJournal of visualized experiments : JoVE2011

A quantitative assay for insulin-expressing colony-forming progenitors.

Michael Winkler, Nancy Trieu, Tao Feng, Liang Jin, Stephanie Walker, Lipi Singh, Hsun Teresa Ku

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Michael WinklerDepartment of Biotechnology & Bioinformatics, California State University Channel Islands, USA.
Nancy Trieu
Tao Feng
Liang Jin
Stephanie Walker
Lipi Singh
Hsun Teresa Ku
City of Hope · USCalifornia State University, Channel Islands · US

Funding

Insulin-Expressing Colony Forming ProgenitorsR01DK081587 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI KU, HSUN TERESA · 2008 to 2012
$1.7M
Endocrine Pancreas from Sox17+ Endoderm ProgenitorsR21DK069997 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KU, HSUN TERESA · 2006 to 2007
$334k
NIDDK NIH HHS R01 DK081587NIDDK NIH HHS R01DK081587NIDDK NIH HHS R21 DK069997NIDDK NIH HHS R21DK069997
6 · The paper itself

Abstract

The field of pancreatic stem and progenitor cell biology has been hampered by a lack of in vitro functional and quantitative assays that allow for the analysis of the single cell. Analyses of single progenitors are of critical importance because they provide definitive ways to unequivocally demonstrate the lineage potential of individual progenitors. Although methods have been devised to generate "pancreatospheres" in suspension culture from single cells, several limitations exist. First, it is time-consuming to perform single cell deposition for a large number of cells, which in turn commands large volumes of culture media and space. Second, numeration of the resulting pancreatospheres is labor-intensive, especially when the frequency of the pancreatosphere-initiating progenitors is low. Third, the pancreatosphere assay is not an efficient method to allow both the proliferation and differentiation of pancreatic progenitors in the same culture well, restricting the usefulness of the assay. To overcome these limitations, a semi-solid media based colony assay for pancreatic progenitors has been developed and is presented in this report. This method takes advantage of an existing concept from the hematopoietic colony assay, in which methylcellulose is used to provide viscosity to the media, allowing the progenitor cells to stay in three-dimensional space as they undergo proliferation as well as differentiation. To enrich insulin-expressing colony-forming progenitors from a heterogeneous population, we utilized cells that express neurogenin (Ngn) 3, a pancreatic endocrine progenitor cell marker. Murine embryonic stem (ES) cell-derived Ngn3 expressing cells tagged with the enhanced green fluorescent protein reporter were sorted and as many as 25,000 cells per well were plated into low-attachment 24-well culture dishes. Each well contained 500 μL of semi-solid media with the following major components: methylcellulose, Matrigel, nicotinamide, exendin-4, activin βB, and conditioned media collected from murine ES cell-derived pancreatic-like cells. After 8 to 12 days of culture, insulin-expressing colonies with distinctive morphology were formed and could be further analyzed for pancreatic gene expression using quantitative RT-PCR and immunoflourescent staining to determine the lineage composition of each colony. In summary, our colony assay allows easy detection and quantification of functional progenitors within a heterogeneous population of cells. In addition, the semi-solid media format allows uniform presentation of extracellular matrix components and growth factors to cells, enabling progenitors to proliferate and differentiate in vitro. This colony assay provides unique opportunities for mechanistic studies of pancreatic progenitor cells at the single cell level.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCell DifferentiationColony-Forming Units AssayCulture Media, ConditionedEmbryonic Stem CellsGreen Fluorescent ProteinsInsulinMiceMice, TransgenicNerve Tissue ProteinsPancreasBasic Helix-Loop-Helix ProteinsCulture Media, Conditionedenhanced green fluorescent proteinGreen Fluorescent ProteinsInsulinNerve Tissue ProteinsNeurog3 protein, mouse

Identifiers

PMID22143165
PMCPMC3308582
OpenAlexW2009895281

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.