Evidence map›Paper›PMID 22140652›Full record

ArticleCancer discovery2011

Characterization of KRAS rearrangements in metastatic prostate cancer.

Xiao-Song Wang, Sunita Shankar, Saravana M Dhanasekaran, Bushra Ateeq, Atsuo T Sasaki, Xiaojun Jing, Daniel Robinson, Qi Cao, John R Prensner, Anastasia K Yocum and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer discovery, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 103 citations in OpenAlex.

  1. Review
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  15. TargetingCancers · 2021
    Review
  16. Article
  17. Synthesis of the PET TracerJournal of nuclear medicine : official publication, Society of Nuclear Medicine · 2020
    Article
  18. Article
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  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 6 institutions in 1 country.

Xiao-Song WangMichigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, Michigan, USA.
Sunita Shankar
Saravana M Dhanasekaran
Bushra Ateeq
Atsuo T Sasaki
Xiaojun Jing
Daniel Robinson
Qi Cao
John R Prensner
Anastasia K Yocum
Rui Wang
Daniel F Fries
Bo Han
Irfan A Asangani
Xuhong Cao
Yong Li
Gilbert S Omenn
Dorothee Pflueger
Anuradha Gopalan
Victor E Reuter
Emily Rose Kahoud
Lewis C Cantley
Mark A Rubin
Nallasivam Palanisamy
Sooryanarayana Varambally
Arul M Chinnaiyan
Memorial Sloan Kettering Cancer Center · USBeth Israel Deaconess Medical Center · USMichigan Center for Translational Pathology · USCornell University · USHoward Hughes Medical Institute · USHarvard University · US

Funding

VACCINIA PSA FOR ANDROGEN-MODULATED POST-SURGICAL RECURRENCE OF PROSTATE CANCERP50CA069568 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1995 to 2013
$31.3M
Nation Center- Integrative Biomedical Informatics(RMI)U54DA021519 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ATHEY, BRIAN DAVID · 2005 to 2010
$21.3M
Transgenic Mouse CoreP01CA089021 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SELLERS, WILLIAM R · 2001 to 2011
$20.1M
Epitomic Biomarkers of Prostate CancerU01CA111275 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M, RUBIN, MARK A. · 2004 to 2015
$6.8M
PROTEIN KINASE SIGNALING PATHWAYSR01GM056203 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CANTLEY, LEWIS C. · 1997 to 2012
$4.5M
Towards Understanding Prostate Cancer HeterogeneityR01CA125612 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI RUBIN, MARK A. · 2007 to 2017
$3.4M
Molecuar Sub-typing of Prostate Cancer Based on Recurrent Gene FusionsR01CA132874 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M · 2009 to 2013
$1.2M
NCI NIH HHS P01 CA089021NCI NIH HHS P50 CA069568NCI NIH HHS P50CA69568NCI NIH HHS R01 CA125612NCI NIH HHS R01 CA125612-01NCI NIH HHS R01 CA132874NCI NIH HHS R01CA132874NCI NIH HHS U01 CA111275NCI NIH HHS UO1 CA111275NIDA NIH HHS U54 DA021519NIDA NIH HHS U54 DA21519-01A1NIGMS NIH HHS R01 GM056203
6 · The paper itself

Abstract

unlabelledUsing an integrative genomics approach called amplification breakpoint ranking and assembly analysis, we nominated KRAS as a gene fusion with the ubiquitin-conjugating enzyme UBE2L3 in the DU145 cell line, originally derived from prostate cancer metastasis to the brain. Interestingly, analysis of tissues revealed that 2 of 62 metastatic prostate cancers harbored aberrations at the KRAS locus. In DU145 cells, UBE2L3-KRAS produces a fusion protein, a specific knockdown of which attenuates cell invasion and xenograft growth. Ectopic expression of the UBE2L3-KRAS fusion protein exhibits transforming activity in NIH 3T3 fibroblasts and RWPE prostate epithelial cells in vitro and in vivo. In NIH 3T3 cells, UBE2L3-KRAS attenuates MEK/ERK signaling, commonly engaged by oncogenic mutant KRAS, and instead signals via AKT and p38 mitogen-activated protein kinase (MAPK) pathways. This is the first report of a gene fusion involving the Ras family, suggesting that this aberration may drive metastatic progression in a rare subset of prostate cancers. SIGNIFICANCE: This is the first description of an oncogenic gene fusion of KRAS, one of the most studied proto-oncogenes. KRAS rearrangement may represent the driving mutation in a rare subset of metastatic prostate cancers, emphasizing the importance of RAS-RAF-MAPK signaling in this disease.

Indexed as

Gene RearrangementAnimalsCell Line, TumorExtracellular Signal-Regulated MAP KinasesGene FusionHEK293 CellsHumansMaleMAP Kinase Kinase KinasesMiceMutationNIH 3T3 Cellsp38 Mitogen-Activated Protein KinasesProstatic NeoplasmsProto-Oncogene ProteinsProto-Oncogene Proteins c-aktExtracellular Signal-Regulated MAP KinasesHras protein, mouseKRAS protein, humanMAP Kinase Kinase Kinasesp38 Mitogen-Activated Protein KinasesProto-Oncogene ProteinsProto-Oncogene Proteins c-aktProto-Oncogene Proteins p21(ras)ras ProteinsUbiquitin-Conjugating Enzymesbioinformaticsgene fusiongenomic amplificationKRASprostate cancer

Identifiers

PMID22140652
PMCPMC3227139
OpenAlexW2123316972

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.