Evidence map›Paper›PMID 22138055›Full record

ArticleDevelopmental biology2012

Some, but not all, retromer components promote morphogenesis of C. elegans sensory compartments.

Grigorios Oikonomou, Elliot A Perens, Yun Lu, Shai Shaham

Abstract read
In one paragraph

Article in Developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.3field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Glia Development and Function in the NematodeCold Spring Harbor perspectives in biology · 2024
    Review
  2. Article
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  4. Review
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  6. Article
  7. Review
  8. Journal of developmental biology · 2020
    Review
  9. Morphogenesis of neurons and glia within an epithelium.Development (Cambridge, England) · 2019
    Article
  10. Review
  11. Article
  12. Antagonistic regulation of trafficking toProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Article
  14. Review
  15. C. elegans as a model for membrane traffic.WormBook : the online review of C. elegans biology · 2014
    Review
  16. Article
  17. Cell-type-specific promoters forJournal of neurogenetics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Grigorios OikonomouLaboratory of Developmental Genetics, The Rockefeller University, New York, NY 10065, USA.
Elliot A Perens
Yun Lu
Shai Shaham
Rockefeller University · US

Funding

Glial control of sensory neuron functionR01NS064273 · NINDS · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2008 to 2017
$3.7M
Glial control of neuronal receptive ending morphologyR01NS073121 · NINDS · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2010 to 2014
$2.1M
Lumen formation during tubulogenesis in C. elegansR01HD052677 · NICHD · ROCKEFELLER UNIVERSITY · PI SHAHAM, SHAI · 2009 to 2010
$845k
NICHD NIH HHS R01 HD052677NICHD NIH HHS R01HD052677NINDS NIH HHS NS064273NINDS NIH HHS R01 NS064273NINDS NIH HHS R01 NS073121NINDS NIH HHS R01NS073121
6 · The paper itself

Abstract

The endings of sensory receptor cells often lie within specialized compartments formed by glial cells. The main sensory organ of Caenorhabditis elegans, the amphid, provides a powerful setting for studying glial compartment morphogenesis. Our previous studies showed that amphid compartment size is controlled by opposing activities of the Nemo-like kinase LIT-1, which promotes compartment expansion, and the Patched-related protein DAF-6, which restricts compartment growth. From a genetic screen for mutations able to suppress the bloated sensory compartments of daf-6 mutants, we identified an allele of the sorting nexin gene snx-1. SNX-1 protein is a component of the retromer, a protein complex that facilitates recycling of transmembrane proteins from the endosome to the Golgi network. We find that snx-1 functions cell autonomously within glia to promote sensory compartment growth, and that SNX-1 protein is enriched near the surface of the sensory compartment. snx-1 interacts genetically with lit-1 and another regulator of compartment size, the Dispatched-related gene che-14. Mutations in snx-3 and vps-29, also retromer genes, can suppress daf-6 defects. Surprisingly, however, remaining retromer components seem not to be involved. Our results suggest that a novel assembly of retromer components is important for determining sensory compartment dimensions.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsMembrane ProteinsMicroscopy, Electron, TransmissionMicroscopy, FluorescenceMorphogenesisMultiprotein ComplexesMutationNeurogliaPlasmidsProtein Serine-Threonine KinasesSensory Receptor CellsSorting NexinsCaenorhabditis elegans ProteinsDAF-6 protein, C eleganslit-1 protein, C elegansMembrane ProteinsMultiprotein ComplexesProtein Serine-Threonine KinasesSNX-1 protein, C elegansSorting Nexins

Identifiers

PMID22138055
PMCPMC3254776
OpenAlexW2137373242

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.