Evidence map›Paper›PMID 22135303›Full record

ArticleNucleic acids research2012

GADD45α inhibition of DNMT1 dependent DNA methylation during homology directed DNA repair.

Bongyong Lee, Annalisa Morano, Antonio Porcellini, Mark T Muller

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Gadd45 in DNA Demethylation and DNA Repair.Advances in experimental medicine and biology · 2022
    Article
  4. Article
  5. Article
  6. DNA methyltransferases in hematological malignancies.Journal of genetics and genomics = Yi chuan xue bao · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Beyond transcriptional silencing: is methylcytosine a widely conserved eukaryotic DNA elimination mechanism?BioEssays : news and reviews in molecular, cellular and developmental biology · 2014
    Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Bongyong LeeDepartment of Molecular Biology and Microbiology, College of Medicine, University of Central Florida, Orlando, FL 32826-3227, USA.
Annalisa Morano
Antonio Porcellini
Mark T Muller
University of Central Florida · USUniversity of Naples Federico II · IT

Funding

DNA Methylase Covalent Complexes in CancerR01CA098214 · NCI · UNIVERSITY OF CENTRAL FLORIDA · PI MULLER, MARK T · 2004 to 2007
$928k
Makorin-1 Control of TelomeraseR21CA127416 · NCI · UNIVERSITY OF CENTRAL FLORIDA · PI MULLER, MARK T · 2007 to 2008
$312k
NCI NIH HHS CA098214NCI NIH HHS CA127416
6 · The paper itself

Abstract

In this work, we examine regulation of DNA methyltransferase 1 (DNMT1) by the DNA damage inducible protein, GADD45α. We used a system to induce homologous recombination (HR) at a unique double-strand DNA break in a GFP reporter in mammalian cells. After HR, the repaired DNA is hypermethylated in recombinant clones showing low GFP expression (HR-L expressor class), while in high expressor recombinants (HR-H clones) previous methylation patterns are erased. GADD45α, which is transiently induced by double-strand breaks, binds to chromatin undergoing HR repair. Ectopic overexpression of GADD45α during repair increases the HR-H fraction of cells (hypomethylated repaired DNA), without altering the recombination frequency. Conversely, silencing of GADD45α increases methylation of the recombined segment and amplifies the HR-L expressor (hypermethylated) population. GADD45α specifically interacts with the catalytic site of DNMT1 and inhibits methylation activity in vitro. We propose that double-strand DNA damage and the resulting HR process involves precise, strand selected DNA methylation by DNMT1 that is regulated by GADD45α. Since GADD45α binds with high avidity to hemimethylated DNA intermediates, it may also provide a barrier to spreading of methylation during or after HR repair.

Indexed as

DNA MethylationRecombinational DNA RepairAlanineAmino Acid SubstitutionCell Cycle ProteinsChromatinDimerizationDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesGADD45 ProteinsGenes, ReporterGreen Fluorescent ProteinsHEK293 CellsHeLa CellsHumansNuclear ProteinsAlanineCell Cycle ProteinsChromatinDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanGADD45A protein, humanGADD45 ProteinsGreen Fluorescent ProteinsNuclear Proteins

Identifiers

PMID22135303
PMCPMC3315326
OpenAlexW2118509736

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.