Evidence map›Paper›PMID 22135092›Full record

ArticleCancer research2012

Functional interaction between responses to lactic acidosis and hypoxia regulates genomic transcriptional outputs.

Xiaohu Tang, Joseph E Lucas, Julia Ling-Yu Chen, Gregory LaMonte, Jianli Wu, Michael Changsheng Wang, Constantinos Koumenis, Jen-Tsan Chi

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 139 citations in OpenAlex.

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  18. ERC-BiP Functional Protein Pathway for Assessing Endoplasmic Reticulum Stress Induced by SARS-CoV-2 Replication after Cell Invasion.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2023
    Article
  19. Review
  20. Cell-Type Dependent Regulation of the Electrogenic NaInternational journal of molecular sciences · 2022
    Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xiaohu TangInstitute for Genome Sciences and Policy, Duke University, Durham, North Carolina, USA.
Joseph E Lucas
Julia Ling-Yu Chen
Gregory LaMonte
Jianli Wu
Michael Changsheng Wang
Constantinos Koumenis
Jen-Tsan Chi
Duke University · USUniversity of Pennsylvania · US

Funding

Role of elF2a phosphorylation and ER stress in hypoxia tolerance and tumor growthR01CA094214 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI KOUMENIS, CONSTANTINOS · 2002 to 2016
$3.6M
Gene expression programs of lactic acidosis in human cancersR01CA125618 · NCI · DUKE UNIVERSITY · PI CHI, JEN-TSAN ASHLEY · 2007 to 2016
$3.3M
NCI NIH HHS R01 CA094214NCI NIH HHS R01 CA125618NCI NIH HHS R01CA125618NCI NIH HHS R01CA94214
6 · The paper itself

Abstract

Within solid tumor microenvironments, lactic acidosis, and hypoxia each have powerful effects on cancer pathophysiology. However, the influence that these processes exert on each other is unknown. Here, we report that a significant portion of the transcriptional response to hypoxia elicited in cancer cells is abolished by simultaneous exposure to lactic acidosis. In particular, lactic acidosis abolished stabilization of HIF-1α protein which occurs normally under hypoxic conditions. In contrast, lactic acidosis strongly synergized with hypoxia to activate the unfolded protein response (UPR) and an inflammatory response, displaying a strong similarity to ATF4-driven amino acid deprivation responses (AAR). In certain breast tumors and breast tumor cells examined, an integrative analysis of gene expression and array CGH data revealed DNA copy number alterations at the ATF4 locus, an important activator of the UPR/AAR pathway. In this setting, varying ATF4 levels influenced the survival of cells after exposure to hypoxia and lactic acidosis. Our findings reveal that the condition of lactic acidosis present in solid tumors inhibits canonical hypoxia responses and activates UPR and inflammation responses. Furthermore, these data suggest that ATF4 status may be a critical determinant of the ability of cancer cells to adapt to oxygen and acidity fluctuations in the tumor microenvironment, perhaps linking short-term transcriptional responses to long-term selection for copy number alterations in cancer cells.

Indexed as

Acidosis, LacticActivating Transcription Factor 4Breast NeoplasmsCell HypoxiaCell Line, TumorFemaleGene AmplificationGene Expression Regulation, NeoplasticGenomicsHumansHypoxia-Inducible Factor 1, alpha SubunitSignal TransductionTransfectionTumor MicroenvironmentActivating Transcription Factor 4ATF4 protein, humanHIF1A protein, humanHypoxia-Inducible Factor 1, alpha Subunit

Identifiers

PMID22135092
PMCPMC3261313
OpenAlexW2058106994

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.