Evidence map›Paper›PMID 22134548›Full record

ArticleEMBO reports2011

A new proofreading mechanism for lesion bypass by DNA polymerase-λ.

Emmanuele Crespan, Giovanni Maga, Ulrich Hübscher

Abstract read
In one paragraph

Article in EMBO reports, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Requirement for transient metal ions revealed through computational analysis for DNA polymerase going in reverse.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  7. Article
  8. Translesion DNA synthesis and mutagenesis in eukaryotes.Cold Spring Harbor perspectives in biology · 2013
    Review
  9. A switch between DNA polymerases δ and λ promotes error-free bypass of 8-oxo-G lesions.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Emmanuele CrespanInstitute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.
Giovanni Maga
Ulrich Hübscher

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Replicative DNA polymerases (DNA pols) increase their fidelity by removing misincorporated nucleotides with their 3' → 5' exonuclease activity. Exonuclease activity reduces translesion synthesis (TLS) efficiency and TLS DNA pols lack 3' → 5' exonuclease activity. Here we show that physiological concentrations of pyrophosphate (PP(i)) activate the pyrophosphorolytic activity by DNA pol-λ, allowing the preferential excision of the incorrectly incorporated A opposite a 7,8-dihydro-8-oxoguanine lesion, or T opposite a 6-methyl-guanine, with respect to the correct C. This is the first example of an alternative proofreading mechanism used during TLS.

Indexed as

Deoxyadenine NucleotidesDiphosphatesDNA Breaks, Single-StrandedDNA Polymerase betaDNA RepairDNA ReplicationEnzyme ActivationGuanosineHumans8-hydroxyguanosineDeoxyadenine NucleotidesDiphosphatesdiphosphoric acidDNA Polymerase betaDNA polymerase beta2Guanosine

Identifiers

PMID22134548
PMCPMC3246252

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.