Evidence map›Paper›PMID 22134169›Full record

ArticleBlood2012

AUF-1 and YB-1 are critical determinants of β-globin mRNA expression in erythroid cells.

Sebastiaan van Zalen, Grace R Jeschke, Elizabeth O Hexner, J Eric Russell

Open access · greenAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Structural determinants of human ζ-globin mRNA stability.Journal of hematology & oncology · 2014
    Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sebastiaan van ZalenDepartment of Medicine (Hematology-Oncology), Perelman School of Medicine, University of Pennsylvania, and The Children’s Hospital of Philadelphia, 3615 Civic Center Blvd., Philadelphia, PA 19104, USA.
Grace R Jeschke
Elizabeth O Hexner
J Eric Russell
Children's Hospital of Philadelphia · US

Funding

REGULATION AND FUNCTION OF A HUMAN EMBRYONIC GLOBINR01HL061399 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI RUSSELL, J ERIC · 1999 to 2012
$3.9M
Nucleolin-mediated stabilization of human B-globin mRNAR01HL082754 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI RUSSELL, J ERIC · 2007 to 2011
$2.0M
NHLBI NIH HHS HL082754NHLBI NIH HHS HL61399NHLBI NIH HHS R01 HL061399NHLBI NIH HHS R01 HL082754
6 · The paper itself

Abstract

The normal accumulation of β-globin protein in terminally differentiating erythroid cells is critically dependent on the high stability of its encoding mRNA. The molecular basis for this property, though, is incompletely understood. Factors that regulate β-globin mRNA within the nucleus of early erythroid progenitors are unlikely to account for the constitutively high half-life of β-globin mRNA in the cytoplasm of their anucleate erythroid progeny. We conducted in vitro protein-RNA binding analyses that identified a cytoplasm-restricted β-globin messenger ribonucleoprotein (mRNP) complex in both cultured K562 cells and erythroid-differentiated human CD34(+) cells. This novel mRNP targets a specific guanine-rich pentanucleotide in a region of the β-globin 3'untranslated region that has recently been implicated as a determinant of β-globin mRNA stability. Subsequent affinity-enrichment analyses identified AUF-1 and YB-1, 2 cytoplasmic proteins with well-established roles in RNA biology, as trans-acting components of the mRNP. Factor-depletion studies conducted in vivo demonstrated the importance of the mRNP to normal steady-state levels of β-globin mRNA in erythroid precursors. These data define a previously unrecognized mechanism for the posttranscriptional regulation of β-globin mRNA during normal erythropoiesis, providing new therapeutic targets for disorders of β-globin gene expression.

Indexed as

Gene Expression RegulationRNA Stability3' Untranslated RegionsAntigens, CD34beta-GlobinsCells, CulturedElectrophoretic Mobility Shift AssayErythroid CellsFetal BloodGene SilencingHeLa CellsHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HumansK562 CellsMutation3' Untranslated RegionsAntigens, CD34beta-GlobinsHeterogeneous-Nuclear Ribonucleoprotein DHeterogeneous Nuclear Ribonucleoprotein D0HNRNPD protein, humanRecombinant ProteinsRibonucleoproteinsRNA, MessengerRNA, Small InterferingY-Box-Binding Protein 1YBX1 protein, human

Identifiers

PMID22134169
PMCPMC3271717
OpenAlexW2028798136

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.