Evidence map›Paper›PMID 22133519›Full record

ArticleBiosensors & bioelectronics2012

Visual detection of gene mutations based on isothermal strand-displacement polymerase reaction and lateral flow strip.

Yuqing He, Kang Zeng, Sanquan Zhang, Anant S Gurung, Meenu Baloda, Xibao Zhang, Guodong Liu

Open access · greenAbstract read
In one paragraph

Article in Biosensors & bioelectronics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. [Application of gold nanoparticles-based lateral flow strip for dengue virus detection based on strand-displacement amplification].Zhejiang da xue xue bao. Yi xue ban = Journal of Zhejiang University. Medical sciences · 2018
    Article
  10. Article
  11. Article
  12. Simultaneous detection of nucleic acid and protein using gold nanoparticles and lateral flow device.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2014
    Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Yuqing HeDepartment of Dermatology, Guangzhou Institute of Dermatology, Guangzhou 510095, China. dr.hyq@hotmail.com
Kang Zeng
Sanquan Zhang
Anant S Gurung
Meenu Baloda
Xibao Zhang
Guodong Liu
North Dakota State University · USGuangzhou Institute of Dermatology · CNSouthern Medical University · CN

Funding

Development of a Hand-Held Cancer Biomarker MonitorR21CA137703 · NCI · NORTH DAKOTA STATE UNIVERSITY · PI LIU, GUODONG · 2010 to 2011
$338k
NCI NIH HHS R21 CA137703NCI NIH HHS R21CA137703
6 · The paper itself

Abstract

Here, we describe a simple and sensitive approach for visual detection of gene mutations based on isothermal strand-displacement polymerase reactions (ISDPR) and lateral flow strip (LFS). The concept was first demonstrated by detecting the R156H-mutant gene of keratin 10 in Epidermolytic hyperkeratosis (EHK). In the presence of biotin-modified hairpin DNA and digoxin-modified primer, the R156H-mutant DNA triggered the ISDPR to produce numerous digoxin- and biotin-attached duplex DNA products. The product was detected on the LFS through dual immunoreactions (anti-digoxin antibody on the gold nanoparticle (Au-NP) and digoxin on the duplex, anti-biotin antibody on the LFS test zone and biotin on the duplex). The accumulation of Au-NPs produced the characteristic red band, enabling visual detection of the mutant gene without instrumentation. After systematic optimization of the ISDPR experimental conditions and the parameters of the assay, the current approach was capable of detecting as low as 1-fM R156H-mutant DNA within 75 min without instrumentation. Differentiation of R156H- and R156C-mutant DNA on the R156 mutation site was realized by using fluorescein- and biotin-modified hairpin probes in the ISDPR process. The approach thus provides a simple, sensitive, and low-cost tool for the detection of gene mutations.

Indexed as

Reagent StripsBiosensing TechniquesDNADNA-Directed DNA PolymeraseDNA Mutational AnalysisEquipment DesignEquipment Failure AnalysisHumansHyperkeratosis, EpidermolyticKeratin-10MicrofluidicsMutationReproducibility of ResultsSensitivity and SpecificityTemperatureY-Family DNA PolymerasesDNADNA-Directed DNA PolymeraseKeratin-10POLK protein, humanReagent StripsY-Family DNA Polymerases

Identifiers

PMID22133519
PMCPMC3248977
OpenAlexW2071274456

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.