Evidence map›Paper›PMID 22129074›Full record

ArticleJournal of the American Chemical Society2012

Reaction of cis-3-chloroacrylic acid dehalogenase with an allene substrate, 2,3-butadienoate: hydration via an enamine.

Gottfried K Schroeder, William H Johnson, Jamison P Huddleston, Hector Serrano, Kenneth A Johnson, Christian P Whitman

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Gottfried K SchroederDivision of Medicinal Chemistry, College of Pharmacy, University of Texas, Austin, Texas 78712, USA.
William H Johnson
Jamison P Huddleston
Hector Serrano
Kenneth A Johnson
Christian P Whitman
The University of Texas at Austin · US

Funding

Structure and Mechanism in the Tautomerase SuperfamilyR01GM065324 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI WHITMAN, CHRISTIAN P. · 2002 to 2011
$2.3M
Pre-steady State Kinetic Analysis of cis-3-Chloroacrylic Acid DehalogenaseF32GM089083 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI SCHROEDER, GOTTFRIED KARL · 2009 to 2010
$98k
NIGMS NIH HHS F32 GM089083NIGMS NIH HHS GM-65324NIGMS NIH HHS R01 GM065324
6 · The paper itself

Abstract

cis-3-Chloroacrylic acid dehalogenase (cis-CaaD) catalyzes the hydrolytic dehalogenation of cis-3-haloacrylates to yield malonate semialdehyde. The enzyme processes other substrates including an allene (2,3-butadienoate) to produce acetoacetate. In the course of a stereochemical analysis of the cis-CaaD-catalyzed reaction using this allene, the enzyme was unexpectedly inactivated in the presence of NaBH(4) by the reduction of a covalent enzyme-substrate bond. Covalent modification was surprising because the accumulated evidence for cis-CaaD dehalogenation favored a mechanism involving direct substrate hydration mediated by Pro-1. However, the results of subsequent mechanistic, pre-steady state and full progress kinetic experiments are consistent with a mechanism in which an enamine forms between Pro-1 and the allene. Hydrolysis of the enamine or an imine tautomer produces acetoacetate. Reduction of the imine species is likely responsible for the observed enzyme inactivation. This is the first reported observation of a tautomerase superfamily member functioning by covalent catalysis. The results may suggest that some fraction of the cis-CaaD-catalyzed dehalogenation of cis-3-haloacrylates also proceeds by covalent catalysis.

Indexed as

AlkadienesAminesBiocatalysisButyratesEnzyme InhibitorsHydrolasesKineticsModels, ChemicalModels, MolecularPeptide MappingProtein Structure, SecondaryPseudomonasStaphylococcus aureusStereoisomerismAlkadienesAminesButyratescis-3-chloroacrylic acid dehalogenaseEnzyme InhibitorsHydrolasespropadiene

Identifiers

PMID22129074
PMCPMC3257395
OpenAlexW2038720747

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.