Evidence map›Paper›PMID 22125637›Full record

ArticlePloS one2011

The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes.

John M Chaston, Garret Suen, Sarah L Tucker, Aaron W Andersen, Archna Bhasin, Edna Bode, Helge B Bode, Alexander O Brachmann, Charles E Cowles, Kimberly N Cowles and 46 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 203 citations in OpenAlex.

  1. Article
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  8. Review
  9. ExploringMolecules (Basel, Switzerland) · 2024
    Review
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  11. Article
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  13. Article
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  18. Article
  19. Life (Basel, Switzerland) · 2022
    Review
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

56 authors at 18 institutions in 3 countries.

John M ChastonDepartment of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Garret Suen
Sarah L Tucker
Aaron W Andersen
Archna Bhasin
Edna Bode
Helge B Bode
Alexander O Brachmann
Charles E Cowles
Kimberly N Cowles
Creg Darby
Limaris de Léon
Kevin Drace
Zijin Du
Alain Givaudan
Erin E Herbert Tran
Kelsea A Jewell
Jennifer J Knack
Karina C Krasomil-Osterfeld
Ryan Kukor
Anne Lanois
Phil Latreille
Nancy K Leimgruber
Carolyn M Lipke
Renyi Liu
Xiaojun Lu
Eric C Martens
Pradeep R Marri
Claudine Médigue
Megan L Menard
Nancy M Miller
Nydia Morales-Soto
Stacie Norton
Jean-Claude Ogier
Samantha S Orchard
Dongjin Park
Youngjin Park
Barbara A Qurollo
Darby Renneckar Sugar
Gregory R Richards
Zoé Rouy
Brad Slominski
Kathryn Slominski
Holly Snyder
Brian C Tjaden
Ransome van der Hoeven
Roy D Welch
Cathy Wheeler
Bosong Xiang
Brad Barbazuk
Sophie Gaudriault
Brad Goodner
Steven C Slater
Steven Forst
Barry S Goldman
Heidi Goodrich-Blair
University of Wisconsin–Madison · USMonsanto (United States) · USUniversity of Wisconsin–Milwaukee · USGoethe University Frankfurt · DEHiram College · USInstitut Agro Montpellier · FRUniversité de Montpellier · FRUniversity of Arizona · USCentre National de la Recherche Scientifique · FRGenoscope · FRGreat Lakes Bioenergy Research Center · USMercer University · USSyracuse University · USUniversity of California, San Francisco · USUniversity of Florida · USUniversity of Michigan–Ann Arbor · USValdosta State University · USWellesley College · US

Funding

Microbial Pathogenesis &Host Responses Training ProgramT32AI055397 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KLEIN, BRUCE STEVEN · 2003 to 2024
$5.5M
Parasitology and Vector Biology Training ProgramT32AI007414 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI Lyric Colleen Bartholomay · 1992 to 2026
$4.5M
Mutualism between X. nematophila and S. carpocapsaeF32GM072342 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI BHASIN, ARCHNA · 2004 to 2005
$91k
NIAID NIH HHS AI007414NIAID NIH HHS AI55397NIAID NIH HHS T32 AI007414NIAID NIH HHS T32 AI055397NIGMS NIH HHS F32 GM072342
6 · The paper itself

Abstract

Members of the genus Xenorhabdus are entomopathogenic bacteria that associate with nematodes. The nematode-bacteria pair infects and kills insects, with both partners contributing to insect pathogenesis and the bacteria providing nutrition to the nematode from available insect-derived nutrients. The nematode provides the bacteria with protection from predators, access to nutrients, and a mechanism of dispersal. Members of the bacterial genus Photorhabdus also associate with nematodes to kill insects, and both genera of bacteria provide similar services to their different nematode hosts through unique physiological and metabolic mechanisms. We posited that these differences would be reflected in their respective genomes. To test this, we sequenced to completion the genomes of Xenorhabdus nematophila ATCC 19061 and Xenorhabdus bovienii SS-2004. As expected, both Xenorhabdus genomes encode many anti-insecticidal compounds, commensurate with their entomopathogenic lifestyle. Despite the similarities in lifestyle between Xenorhabdus and Photorhabdus bacteria, a comparative analysis of the Xenorhabdus, Photorhabdus luminescens, and P. asymbiotica genomes suggests genomic divergence. These findings indicate that evolutionary changes shaped by symbiotic interactions can follow different routes to achieve similar end points.

Indexed as

Genetic VariationAnimalsChromosomes, BacterialDNA, BacterialEnterobacteriaceaeGenome, BacterialGenomicsHost-Parasite InteractionsHost-Pathogen InteractionsInsectaMolecular Sequence DataNematodaPhotorhabdusPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID22125637
PMCPMC3220699
OpenAlexW2136326394

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.