Evidence map›Paper›PMID 22124118›Full record

ArticleThe Journal of general physiology2011

The core domain as the force sensor of the yeast mechanosensitive TRP channel.

Zhenwei Su, Andriy Anishkin, Ching Kung, Yoshiro Saimi

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Phosphatidylinositol 3,5-bisphosphate regulates CaTraffic (Copenhagen, Denmark) · 2020
    Article
  4. Article
  5. Feeling the hidden mechanical forces in lipid bilayer is an original sense.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Review
  6. Mechanosensitivity is mediated directly by the lipid membrane in TRAAK and TREK1 K+ channels.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Zhenwei SuLaboratory of Molecular Biology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Andriy Anishkin
Ching Kung
Yoshiro Saimi
University of Wisconsin–Madison · USUniversity of Maryland, College Park · US

Funding

Molecular Basis of Hypertonicity Sensing by Yeast Yvc1pR01GM054867 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KUNG, CHING · 1998 to 2010
$2.2M
NIGMS NIH HHS GM 54867NIGMS NIH HHS R01 GM054867NIGMS NIH HHS R03 GM125020
6 · The paper itself

Abstract

Stretch-activated conductances are commonly encountered in careful electric recordings. Those of known proteins (TRP, MscL, MscS, K(2p), Kv, etc.) all share a core, which houses the ion pathway and the gate, but no recognizable force-sensing domain. Like animal TRPs, the yeast TRPY1 is polymodal, activated by stretch force, Ca(2+), etc. To test whether its S5-S6 core senses the stretch force, we tried to uncouple it from the peripheral domains by strategic peptide insertions to block the covalent core-periphery interactions. Insertion of long unstructured peptides should distort, if not disrupt, protein structures that transmit force. Such insertions between S6 and the C-terminal tail largely removed Ca(2+) activation, showing their effectiveness. However, such insertions as well as those between S5 and the N-terminal region, which includes S1-S4, did not significantly alter mechanosensitivity. Even insertions at both locations flanking the S5-S6 core did not much alter mechanosensitivity. Tryptophan scanning mutations in S5 were also constructed to perturb possible noncovalent core-periphery contacts. The testable tryptophan mutations also have little or no effects on mechanosensitivity. Boltzmann fits of the wild-type force-response curves agree with a structural homology model for a stretch-induced core expansion of ~2 nm(2) upon opening. We hypothesize that membrane tension pulls on S5-S6, expanding the core and opening the TRPY1 gate. The core being the major force sensor offers the simplest, though not the only, explanation of why so many channels of disparate designs are mechanically sensitive. Compared with the bacterial MscL, TRPY1 is much less sensitive to force, befitting a polymodal channel that relies on multiple stimuli.

Indexed as

CalciumCalcium ChannelsIon Channel GatingMechanotransduction, CellularMutagenesis, Site-DirectedProtein ConformationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTransient Receptor Potential ChannelsTRPC Cation ChannelsTryptophanCalciumCalcium ChannelsSaccharomyces cerevisiae ProteinsTransient Receptor Potential ChannelsTRPC Cation ChannelsTryptophanYvc1 protein, S cerevisiae

Identifiers

PMID22124118
PMCPMC3226973
OpenAlexW2112746351

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.