Evidence map›Paper›PMID 22123988›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2011

X-ray structure of the arenavirus glycoprotein GP2 in its postfusion hairpin conformation.

Sébastien Igonet, Marie-Christine Vaney, Clemens Vonrhein, Clemens Vonhrein, Gérard Bricogne, Enrico A Stura, Hans Hengartner, Bruno Eschli, Félix A Rey

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 123 citations in OpenAlex.

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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Vonhrein, Clemens [corrected to Vonrhein, Clemens]
5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Sébastien IgonetDépartement de Virologie, Unité de Virologie Structurale, Institut Pasteur, F-75724 Paris Cedex 15, France.
Marie-Christine Vaney
Clemens Vonrhein
Clemens Vonhrein
Gérard Bricogne
Enrico A Stura
Hans Hengartner
Bruno Eschli
Félix A Rey
Global Phasing (United Kingdom) · GBInstitut de Virologie · FRUniversity Hospital of Zurich · CHCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arenaviruses are important agents of zoonotic disease worldwide. The virions expose a tripartite envelope glycoprotein complex at their surface, formed by the glycoprotein subunits GP1, GP2 and the stable signal peptide. This complex is responsible for binding to target cells and for the subsequent fusion of viral and host-cell membranes for entry. During this process, the acidic environment of the endosome triggers a fusogenic conformational change in the transmembrane GP2 subunit of the complex. We report here the crystal structure of the recombinant GP2 ectodomain of the lymphocytic choriomeningitis virus, the arenavirus type species, at 1.8-Å resolution. The structure shows the characteristic trimeric coiled coil present in class I viral fusion proteins, with a central stutter that allows a close structural alignment with most of the available structures of class I and III viral fusion proteins. The structure further shows a number of intrachain salt bridges stabilizing the postfusion hairpin conformation, one of which involves an aspartic acid that appears released from a critical interaction with the stable signal peptide upon low pH activation.

Indexed as

Virus InternalizationAmino Acid SequenceCrystallography, X-RayGlycoproteinsLymphocytic choriomeningitis virusModels, MolecularMolecular Sequence DataProtein MultimerizationProtein Structure, SecondarySaltsSequence AlignmentViral Fusion ProteinsGlycoproteinsSaltsViral Fusion Proteins

Identifiers

PMID22123988
PMCPMC3250147
OpenAlexW1965136586

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.