Evidence map›Paper›PMID 22123825›Full record

ArticleThe Journal of biological chemistry2012

Propeptide of aminopeptidase 1 protein mediates aggregation and vesicle formation in cytoplasm-to-vacuole targeting pathway.

Mariana Morales Quinones, Jared T Winston, Per E Stromhaug

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Autophagy in cancers including brain tumors: role of MicroRNAs.Cell communication and signaling : CCS · 2020
    Review
  3. Proteomic response ofFood science and biotechnology · 2019
    Article
  4. Article
  5. Article
  6. Mechanisms of Selective Autophagy.Journal of molecular biology · 2016
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Selective autophagy in budding yeast.Cell death and differentiation · 2013
    Review
  12. Autophagy: more than a nonselective pathway.International journal of cell biology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mariana Morales QuinonesDepartment of Biological Sciences, University of Missouri, Columbia, Missouri 65211.
Jared T WinstonDepartment of Biological Sciences, University of Missouri, Columbia, Missouri 65211.
Per E StromhaugDepartment of Biological Sciences, University of Missouri, Columbia, Missouri 65211. Electronic address: per@binghamton.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Misfolded protein aggregation causes disease and aging; autophagy counteracts this by eliminating damaged components, enabling cells to survive starvation. The cytoplasm-to-vacuole targeting pathway in yeast encompasses the aggregation of the premature form of aminopeptidase 1 (prApe1) in cytosol and its sequestration by autophagic proteins into a vesicle for vacuolar transport. We show that the propeptide of Ape1 is important for aggregation and vesicle formation and that it is sufficient for binding to prApe1 and Atg19. Defective aggregation disrupts vacuolar transport, suggesting that aggregate shape is important in vesicle formation, whereas Atg19 binding is not sufficient for vacuolar transport. Aggregation involves hydrophobicity, whereas Atg19 binding requires additional electrostatic interactions. Ape1 dodecamerization may cluster propeptides into trimeric structures, with sufficient affinity to form propeptide hexamers by binding to other dodecamers, causing aggregation. We show that Ape1 aggregates bind Atg19 and Atg8 in vitro; this could be used as a scaffold for an in vitro assay of autophagosome formation to elucidate the mechanisms of autophagy.

Indexed as

AminopeptidasesAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsCytoplasmEnzyme PrecursorsMicrotubule-Associated ProteinsProtein BindingProtein MultimerizationReceptors, Cell SurfaceSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSecretory VesiclesVacuolesVesicular Transport ProteinsAminopeptidasesAPE1 protein, S cerevisiaeATG19 protein, S cerevisiaeATG8 protein, S cerevisiaeAutophagy-Related Protein 8 FamilyAutophagy-Related ProteinsEnzyme PrecursorsMicrotubule-Associated ProteinsReceptors, Cell SurfaceSaccharomyces cerevisiae ProteinsVesicular Transport Proteins

Identifiers

PMID22123825
PMCPMC3323037

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.