Evidence map›Paper›PMID 22123759›Full record

ArticleJournal of bacteriology2011

Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus.

Jorge Valdes, Francisco Ossandon, Raquel Quatrini, Mark Dopson, David S Holmes

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. The Essential Role of OmpR inMicroorganisms · 2022
    Article
  4. Integrative Assessments on Molecular Taxonomy ofFrontiers in microbiology · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. New Insights IntoFrontiers in microbiology · 2020
    Article
  10. Article
  11. Article
  12. Draft Genome Sequence ofGenome announcements · 2018
    Article
  13. Frontiers in microbiology · 2018
    Article
  14. Article
  15. Sulfur Oxidation in the Acidophilic AutotrophicFrontiers in microbiology · 2018
    Review
  16. Review
  17. Article
  18. Molecular Systematics of the GenusFrontiers in microbiology · 2017
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jorge ValdesCenter for Bioinformatics and Genome Biology, Fundación Ciencia & Vida and Depto. de Ciencias Biologicas, Facultad de Ciencias Biologicas, Universidad Andres Bello, Santiago, Chile.
Francisco Ossandon
Raquel Quatrini
Mark Dopson
David S Holmes
Fundación Ciencia and Vida · CLUniversidad Andrés Bello · CLLinnaeus University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acidithiobacillus thiooxidans is a mesophilic, extremely acidophilic, chemolithoautotrophic gammaproteobacterium that derives energy from the oxidation of sulfur and inorganic sulfur compounds. Here we present the draft genome sequence of A. thiooxidans ATCC 19377, which has allowed the identification of genes for survival and colonization of extremely acidic environments.

Indexed as

Evolution, MolecularGenome, BacterialAcidithiobacillusAcidithiobacillus thiooxidansAcidsBase SequenceMiningMolecular Sequence DataSulfurAcidsSulfur

Identifiers

PMID22123759
PMCPMC3232857
OpenAlexW2127354595

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.