Evidence map›Paper›PMID 22123719›Full record

ArticleInternational journal of gynecological pathology : official journal of the International Society of Gynecological Pathologists2012

Characterization of NOL7 gene point mutations, promoter methylation, and protein expression in cervical cancer.

Colleen L Doçi, Tanmayi P Mankame, Alexander Langerman, Kelly R Ostler, Rajani Kanteti, Timothy Best, Kenan Onel, Lucy A Godley, Ravi Salgia, Mark W Lingen

Abstract read
In one paragraph

Article in International journal of gynecological pathology : official journal of the International Society of Gynecological Pathologists, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Pancancer Analysis of the Oncogenic and Prognostic Role ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Colleen L DoçiDepartment of Pathology, Medicine and Radiation and Cellular Oncology, University of Chicago, Chicago, IL 60637, USA.
Tanmayi P Mankame
Alexander Langerman
Kelly R Ostler
Rajani Kanteti
Timothy Best
Kenan Onel
Lucy A Godley
Ravi Salgia
Mark W Lingen
University of Chicago · US

Funding

Role of c-Met in SCLC and Potential for Novel TherapyR01CA100750 · NCI · UNIVERSITY OF CHICAGO · PI SALGIA, RAVI · 2004 to 2012
$2.2M
Role of Paxillin in Lung CancerR01CA129501 · NCI · UNIVERSITY OF CHICAGO · PI SALGIA, RAVI · 2008 to 2012
$1.8M
NCI NIH HHS 5R01CA100750-07NCI NIH HHS 5R01CA129501-03NCI NIH HHS R01 CA100750NCI NIH HHS R01 CA129501
6 · The paper itself

Abstract

NOL7 is a putative tumor suppressor gene localized to 6p23, a region with frequent loss of heterozygosity in a number of cancers, including cervical cancer (CC). We have previously demonstrated that reintroduction of NOL7 into CC cells altered the angiogenic phenotype and suppressed tumor growth in vivo by 95%. Therefore, to understand its mechanism of inactivation in CC, we investigated the genetic and epigenetic regulation of NOL7. NOL7 mRNA and protein levels were assessed in 13 CC cell lines and 23 consecutive CC specimens by real-time quantitative polymerase chain reaction, western blotting, and immunohistochemistry. Methylation of the NOL7 promoter was analyzed by bisulfite sequencing and mutations were identified through direct sequencing. A CpG island with multiple CpG dinucleotides spanned the 5' untranslated region and first exon of NOL7. However, bisulfite sequencing failed to identify persistent sites of methylation. Mutational sequencing revealed that 40% of the CC specimens and 31% of the CC cell lines harbored somatic mutations that may affect the in vivo function of NOL7. Endogenous NOL7 mRNA and protein expression in CC cell lines were significantly decreased in 46% of the CC cell lines. Finally, immunohistochemistry demonstrated strong NOL7 nucleolar staining in normal tissues that decreased with histologic progression toward CC. NOL7 is inactivated in CC in accordance with the Knudson 2-hit hypothesis through loss of heterozygosity and mutation. Together with evidence of its in vivo tumor suppression, these data support the hypothesis that NOL7 is the legitimate tumor suppressor gene located on 6p23.

Indexed as

Chromosomes, Human, Pair 6DNA MethylationPoint MutationCell Line, TumorCloning, MolecularDNA Mutational AnalysisFemaleGene Expression Regulation, NeoplasticGene SilencingHumansNuclear ProteinsPromoter Regions, GeneticReal-Time Polymerase Chain ReactionSequence Analysis, DNASulfitesTissue Array Analysishydrogen sulfiteNOL7 protein, humanNuclear ProteinsSulfitesTumor Suppressor Proteins

Identifiers

PMID22123719
PMCPMC3237951
OpenAlexW1971678466

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.