Evidence map›Paper›PMID 22121214›Full record

ArticleNucleic acids research2012

Different effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation.

Ricardo Soto-Rifo, Taran Limousin, Paulina S Rubilar, Emiliano P Ricci, Didier Décimo, Olivier Moncorgé, Mary-Anne Trabaud, Patrice André, Andrea Cimarelli, Théophile Ohlmann

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ricardo Soto-RifoINSERM U758, Lyon F-69364, France.
Taran Limousin
Paulina S Rubilar
Emiliano P Ricci
Didier Décimo
Olivier Moncorgé
Mary-Anne Trabaud
Patrice André
Andrea Cimarelli
Théophile Ohlmann
Université Claude Bernard Lyon 1 · FRInserm · FRHospices Civils de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 5'-untranslated region (5'-UTR) of the genomic RNA of human immunodeficiency viruses type-1 (HIV-1) and type-2 (HIV-2) is composed of highly structured RNA motifs essential for viral replication that are expected to interfere with Gag and Gag-Pol translation. Here, we have analyzed and compared the properties by which the viral 5'-UTR drives translation from the genomic RNA of both human immunodeficiency viruses. Our results showed that translation from the HIV-2 gRNA was very poor compared to that of HIV-1. This was rather due to the intrinsic structural motifs in their respective 5'-UTR without involvement of any viral protein. Further investigation pointed to a different role of TAR RNA, which was much inhibitory for HIV-2 translation. Altogether, these data highlight important structural and functional differences between these two human pathogens.

Indexed as

5' Untranslated RegionsHIV Long Terminal RepeatProtein BiosynthesisAnimalsCell Linegag Gene Products, Human Immunodeficiency VirusGenome, ViralHIV-1HIV-2HumansProvirusesRibosomesRNA, Viral5' Untranslated Regionsgag Gene Products, Human Immunodeficiency VirusRNA, Viral

Identifiers

PMID22121214
PMCPMC3315320
OpenAlexW2105830516

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.