Evidence map›Paper›PMID 22120019›Full record

ArticleIntegrative biology : quantitative biosciences from nano to macro2012

Bimolecular integrin-ligand interactions quantified using peptide-functionalized dextran-coated microparticles.

Jessie E P Sun, Justin Vranic, Russell J Composto, Craig Streu, Paul C Billings, Joel S Bennett, John W Weisel, Rustem I Litvinov

Open access · greenAbstract read
In one paragraph

Article in Integrative biology : quantitative biosciences from nano to macro, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Structural control of fibrin bioactivity by mechanical deformation.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. PROBINGNano LIFE · 2013
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jessie E P SunDepartment of Materials Science and Engineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Justin Vranic
Russell J Composto
Craig Streu
Paul C Billings
Joel S Bennett
John W Weisel
Rustem I Litvinov
University of Pennsylvania · USIn-Q-Tel · USSt. Mary's College of Maryland · US

Funding

Subcellular Mechanisms pf Platelet ActivationP01HL040387 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BENNETT, JOEL S. · 1988 to 2018
$35.5M
THE ROLE OF SEMA4D/CD100 AND ITS RECEPTORS IN PLATELET BIOLOGY AND THROMBOSISP50HL081012 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BENNETT, JOEL S. · 2006 to 2010
$11.9M
INTERFACIAL MECHANICS IN INTRAVASCULAR GAS EMBOLISMR01HL060230 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI ECKMANN, DAVID M · 1999 to 2011
$3.8M
STRUCTURAL STUDIES OF BLOOD CLOTTING PROTEINSR01HL030954 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI WEISEL, JOHN W · 1985 to 2008
$3.0M
Structural origin of fibrin clot mechanical propertiesR01HL090774 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI WEISEL, JOHN W · 2009 to 2012
$1.6M
Structural origin of fibrin clot mechanical propertiesR56HL090774 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI WEISEL, JOHN W · 2014 to 2014
$408k
NHLBI NIH HHS HL030954NHLBI NIH HHS HL060230NHLBI NIH HHS HL090774NHLBI NIH HHS HL40387NHLBI NIH HHS HL81012NHLBI NIH HHS P01 HL040387NHLBI NIH HHS P50 HL081012NHLBI NIH HHS R01 HL030954NHLBI NIH HHS R01 HL060230NHLBI NIH HHS R01 HL090774NHLBI NIH HHS R56 HL090774
6 · The paper itself

Abstract

Integrins play a key role in cell-cell and cell-matrix interactions. Artificial surfaces grafted with integrin ligands, mimicking natural interfaces, have been used to study integrin-mediated cell adhesion. Here we report the use of a new chemical engineering technology in combination with single-molecule nanomechanical measurements to quantify peptide binding to integrins. We prepared latex beads with covalently-attached dextran. The beads were then functionalized with the bioactive peptides, cyclic RGDFK (cRGD) and the fibrinogen γC-dodecapeptide (H12), corresponding to the active sites for fibrinogen binding to the platelet integrin αIIbβ3. Using optical tweezers-based force spectroscopy to measure non-specific protein-protein interactions, we found the dextran-coated beads nonreactive towards fibrinogen, thus providing an inert platform for biospecific modifications. Using periodate oxidation followed by reductive amination, we functionalized the bead-attached dextran with either cRGD or H12 and used the peptide-grafted beads to measure single-molecule interactions with the purified αIIbβ3. Bimolecular force spectroscopy revealed that the peptide-functionalized beads were highly and specifically reactive with the immobilized αIIbβ3. Further, the cRGD- and H12-functionalized beads displayed a remarkable interaction profile with a bimodal force distribution up to 90 pN. The cRGD-αIIbβ3 interactions had greater binding strength than that of H12-αIIbβ3, indicating that they are more stable and resistant mechanically, consistent with the platelet reactivity of RGD-containing ligands. Thus, the results reported here describe the mechanistic characteristics of αIIbβ3-ligand interactions, confirming the utility of peptide-functionalized latex beads for the quantitative analysis of molecular recognition.

Indexed as

Binding SitesBlood PlateletsCell AdhesionDextransFibrinogenHumansOptical TweezersPeptides, CyclicPlatelet Glycoprotein GPIIb-IIIa ComplexSpectroscopy, Fourier Transform Infraredcyclic (arginyl-glycyl-aspartyl-phenylalanyl-lysyl)DextransFibrinogenPeptides, CyclicPlatelet Glycoprotein GPIIb-IIIa Complex

Identifiers

PMID22120019
PMCPMC3337774
OpenAlexW2164364806

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.