Evidence map›Paper›PMID 22119790›Full record

ArticleProtein engineering, design & selection : PEDS2012

Purification of CFTR for mass spectrometry analysis: identification of palmitoylation and other post-translational modifications.

Michelle McClure, Lawrence J DeLucas, Landon Wilson, Marjorie Ray, Steven M Rowe, Xiaoyun Wu, Qun Dai, Jeong S Hong, Eric J Sorscher, John C Kappes and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. The Journal of biological chemistry · 2020
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Molecular modelling and molecular dynamics of CFTR.Cellular and molecular life sciences : CMLS · 2017
    Review
  10. Review
  11. Review
  12. Article
  13. The physiology of protein S-acylation.Physiological reviews · 2015
    Review
  14. Article
  15. Article
  16. Ion channel regulation by protein S-acylation.The Journal of general physiology · 2014
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Michelle McClureGregory Fleming James Cystic Fibrosis Research Center, University of Alabama at Birmingham, Birmingham, AL 35294, USA.
Lawrence J DeLucas
Landon Wilson
Marjorie Ray
Steven M Rowe
Xiaoyun Wu
Qun Dai
Jeong S Hong
Eric J Sorscher
John C Kappes
Stephen Barnes
University of Alabama at Birmingham · US

Funding

UAB CF Research and Translation Core CenterP30DK072482 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Brian R. Davis · 2007 to 2026
$23.0M
UAB-UCSD O'Brien Core Center for Acute Kidney Injury ResearchP30DK079337 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI AGARWAL, ANUPAM · 2008 to 2022
$18.3M
PROJECT 4 - POLYPHENOLS AND DAMAGE IN THE EYEP50AT000477 · NCCIH · PURDUE UNIVERSITY WEST LAFAYETTE · PI WEAVER, CONNIE MARIE · 2000 to 2010
$15.0M
Center for Nutrient-Gene Interaction in Cancer PreventionU54CA100949 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BARNES, STEPHEN · 2003 to 2008
$9.7M
UAB Skin Diseases Research CenterP30AR050948 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI TIMARES, LAURA · 2004 to 2013
$5.5M
Mucosal HIV and Immunobiology CenterR24DK064400 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI SMITH, PHILLIP D · 2003 to 2012
$4.8M
Production & Crystallization of Membrane Protein for 3D StructureR01GM095639 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DELUCAS, LAWRENCE J · 2010 to 2013
$1.2M
Premature Termination Codon SuppressionK23DK075788 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ROWE, STEVEN MARK · 2006 to 2010
$638k
SPECT: POLYPHENOLS: SOY &MENARCHE,0STEOPOR, GREEN TEA&BREAST CANCER, NEURODIS S10RR019231 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BARNES, STEPHEN · 2004 to 2004
$465k
Mechanistic Basis Underlying Protein Repair of CFTR Nonsense MutationsR03DK084110 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ROWE, STEVEN MARK · 2009 to 2010
$146k
NCCIH NIH HHS P50AT00477NCI NIH HHS U54 CA100949NCRR NIH HHS S10 RR019231NIAMS NIH HHS P30AR50948NIDDK NIH HHS 1K23DK075788NIDDK NIH HHS 1R03DK084110NIDDK NIH HHS DK64400NIDDK NIH HHS P30 DK072482NIDDK NIH HHS P30DK079337NIDDK NIH HHS R24 DK064400NIGMS NIH HHS R01 GM095639
6 · The paper itself

Abstract

Post-translational modifications (PTMs) play a crucial role during biogenesis of many transmembrane proteins. Previously, it had not been possible to evaluate PTMs in cystic fibrosis transmembrane conductance regulator (CFTR), the epithelial ion channel responsible for cystic fibrosis, because of difficulty obtaining sufficient amounts of purified protein. We recently used an inducible overexpression strategy to generate recombinant CFTR protein at levels suitable for purification and detailed analysis. Using liquid chromatography (LC) tandem and multiple reaction ion monitoring (MRM) mass spectrometry, we identified specific sites of PTMs, including palmitoylation, phosphorylation, methylation and possible ubiquitination. Many of these covalent CFTR modifications have not been described previously, but are likely to influence key and clinically important molecular processes including protein maturation, gating and the mechanisms underlying certain mutations associated with disease.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceBinding SitesBlotting, WesternChromatography, LiquidCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorHEK293 CellsHumansLipoylationMass SpectrometryMethylationMolecular Sequence DataMutationPhosphorylationProteolysisCystic Fibrosis Transmembrane Conductance RegulatorRecombinant ProteinsSerine

Identifiers

PMID22119790
PMCPMC3276306
OpenAlexW2165056594

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.