Evidence map›Paper›PMID 22117759›Full record

ArticleChemical biology & drug design2012

Ligand-induced changes in T box antiterminator RNA stability.

Shu Zhou, George Acquaah-Harrison, Karen D Jack, Stephen C Bergmeier, Jennifer V Hines

Open access · bronzeAbstract read
In one paragraph

Article in Chemical biology & drug design, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  7. Article
  8. T box riboswitches in Actinobacteria: translational regulation via novel tRNA interactions.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Shu ZhouDepartment of Chemistry and Biochemistry, Ohio University, Athens, OH 45701, USA.
George Acquaah-Harrison
Karen D Jack
Stephen C Bergmeier
Jennifer V Hines
Ohio University · US

Funding

Targeting a novel regulatory RNA with novel antibioticsR01GM073188 · NIGMS · OHIO UNIVERSITY ATHENS · PI HINES, JENNIFER V · 2007 to 2010
$1.9M
Structure Function Studies of a RNA Antiterminator BulgeR01GM061048 · NIGMS · OHIO UNIVERSITY ATHENS · PI HINES, JENNIFER V · 2001 to 2005
$1.1M
NIGMS NIH HHS GM073188NIGMS NIH HHS GM61048NIGMS NIH HHS R01 GM061048NIGMS NIH HHS R01 GM073188
6 · The paper itself

Abstract

The T box antiterminator RNA element is an important component of the T box riboswitch that controls the transcription of vital genes in many Gram-positive bacteria. A series of 1,4-disubstituted 1,2,3-triazoles was screened in a fluorescence-monitored thermal denaturation assay to identify ligands that altered the stability of antiterminator model RNA. Several ligands were identified that significantly increased or decreased the melting temperature (T(m) ) of the RNA. The results indicate that this series of triazole ligands can alter the stability of antiterminator model RNA in a structure-dependent manner.

Indexed as

LigandsRiboswitchRNA Stability5' Untranslated RegionsFluorescent DyesGram-Positive BacteriaNucleic Acid DenaturationRNA, BacterialTransition TemperatureTriazoles5' Untranslated RegionsFluorescent DyesLigandsRiboswitchRNA, BacterialTriazoles

Identifiers

PMID22117759
PMCPMC3466076
OpenAlexW1537170607

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.