Evidence map›Paper›PMID 22117008›Full record

ArticleMicrobiology (Reading, England)2012

Diverse responses to UV light exposure in Acinetobacter include the capacity for DNA damage-induced mutagenesis in the opportunistic pathogens Acinetobacter baumannii and Acinetobacter ursingii.

Janelle M Hare, James A Bradley, Ching-Li Lin, Tyler J Elam

Abstract read
In one paragraph

Article in Microbiology (Reading, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Repression ofJournal of bacteriology · 2024
    Article
  6. Review
  7. Alterations in gene expression ofJournal of medicine and life · 2023
    Article
  8. DNA damage response coregulatorFrontiers in cellular and infection microbiology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Update on Multidrug Resistance Efflux Pumps in Acinetobacter spp.Antimicrobial agents and chemotherapy · 2021
    Article
  17. Review
  18. Homodimerization and heterodimerization requirements ofCanadian journal of microbiology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Janelle M HareDepartment of Biology and Chemistry, Morehead State University, Morehead, KY 40351, USA.
James A BradleyDepartment of Biology and Chemistry, Morehead State University, Morehead, KY 40351, USA.
Ching-Li LinDepartment of Biology and Chemistry, Morehead State University, Morehead, KY 40351, USA.
Tyler J ElamDepartment of Biology and Chemistry, Morehead State University, Morehead, KY 40351, USA.

Funding

ZEBRAFISH VISUAL FUNCTION RECOVERY FOLLOWING OPTIC NERVE DAMAGEP20RR016481 · NCRR · UNIVERSITY OF LOUISVILLE · PI MATTINGLY, BRUCE A · 2001 to 2011
$34.8M
Mechanisms of Action of UmuD in Regulating DNA Damage-Induced Genes in a umuC- Deficient mutantR15GM085722 · NIGMS · MOREHEAD STATE UNIVERSITY · PI Janelle M Hare · 2009 to 2026
$1.8M
NCRR NIH HHS 2P20RR016481-09NCRR NIH HHS P20 RR016481NIGMS NIH HHS 1R15GM085722-01A1NIGMS NIH HHS R15 GM085722
6 · The paper itself

Abstract

Error-prone and error-free DNA damage repair responses that are induced in most bacteria after exposure to various chemicals, antibiotics or radiation sources were surveyed across the genus Acinetobacter. The error-prone SOS mutagenesis response occurs when DNA damage induces a cell's umuDC- or dinP-encoded error-prone polymerases. The model strain Acinetobacter baylyi ADP1 possesses an unusual, regulatory umuD allele (umuDAb) with an extended 5' region and only incomplete fragments of umuC. Diverse Acinetobacter species were investigated for the presence of umuDC and their ability to conduct UV-induced mutagenesis. Unlike ADP1, most Acinetobacter strains possessed multiple umuDC loci containing either umuDAb or a umuD allele resembling that of Escherichia coli. The nearly omnipresent umuDAb allele was the ancestral umuD in Acinetobacter, with horizontal gene transfer accounting for over half of the umuDC operons. Despite multiple umuD(Ab)C operons in many strains, only three species conducted UV-induced mutagenesis: Acinetobacter baumannii, Acinetobacter ursingii and Acinetobacter beijerinckii. The type of umuDC locus or mutagenesis phenotype a strain possessed was not correlated with its error-free response of survival after UV exposure, but similar diversity was apparent. The survival of 30 Acinetobacter strains after UV treatment ranged over five orders of magnitude, with the Acinetobacter calcoaceticus-A. baumannii (Acb) complex and haemolytic strains having lower survival than non-Acb or non-haemolytic strains. These observations demonstrate that a genus can possess a range of DNA damage response mechanisms, and suggest that DNA damage-induced mutation could be an important part of the evolution of the emerging pathogens A. baumannii and A. ursingii.

Indexed as

DNA DamageDNA RepairMutagenesisUltraviolet RaysAcinetobacterDNA-Directed DNA PolymeraseDNA Repair EnzymesGenetic VariationMicrobial ViabilityMolecular Sequence DataSequence Analysis, DNASOS Response, GeneticsDNA-Directed DNA PolymeraseDNA Repair Enzymes

Identifiers

PMID22117008
PMCPMC3352118

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.